New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3525894 | 45 (0.630) | 3 (0.040) | 3/258 | NT | 6.3% | coding (340/609 nt) | lexA‑II | transcriptional repressor |
? | NC_002947 | = 3525911 | 46 (0.670) | coding (357/609 nt) | lexA‑II | transcriptional repressor |
TACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGCGAAGTGACCATCAAACGCCTGC > NC_002947/3525751‑3526041 | tACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTAc < 2:417820/149‑1 (MQ=255) gCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACctg > 3:149554/1‑149 (MQ=255) gCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCACATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCCACCCCAGCCTGTTCCGCCGTACCCCCGACTACctc > 3:215202/1‑148 (MQ=255) cTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACctgct > 3:69635/1‑149 (MQ=255) ccGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTTCTGAAg < 6:199563/149‑1 (MQ=255) cGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGCCTACCTGCTGAAgg > 4:31424/1‑149 (MQ=255) cGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAgg > 8:36989/1‑149 (MQ=255) cGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAgg > 6:54768/1‑149 (MQ=255) cGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCCCCGTACCCCCGACTACCTGCTGAAgg > 5:233546/1‑149 (MQ=255) gAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCACCGTACCCCCGACTACCTGCTGAAGGt < 6:233546/149‑1 (MQ=255) gCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGcggg > 7:11905‑M2/1‑145 (MQ=255) ccggccggAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACt < 5:54768/149‑1 (MQ=255) ggccggAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑Cg < 4:69635/149‑1 (MQ=255) aaaTCCTCGAAATACGCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACTAGCAGTTGCTGCTCGACCCGAGCCTGTTCCGCCGTACCCCCGACTACCTTCTGAAGGTGCGGGGCGACT‑CGATGATc < 7:248756/149‑1 (MQ=255) aTCCTCGAAATACGCGTTCTGGGCCAGGTGGCGGCGGGGGGCCCCATCGGCGCGGACCTGGGCATCCACGAGCAGAGGCTGCTCTACCCCAGCCTGTTCCGCCGTACCCCCGcaccttcagcaggtagtcgggggtacgtcggaacagg < 2:58609‑M1/149‑38 (MQ=255) tCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATcgac < 4:135533/149‑1 (MQ=255) cTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATcgacga < 6:278226/149‑1 (MQ=255) ccGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCttt < 5:120411/149‑1 (MQ=255) ccGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCttt < 3:302470/149‑1 (MQ=255) gCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACg < 2:243912/149‑1 (MQ=255) tGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTc < 7:36989/149‑1 (MQ=255) ggcggGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCa > 5:323670/1‑149 (MQ=255) cccccATCGGCCCGGACCTGGGCATCCAAGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCa > 8:347461/1‑148 (MQ=255) aTCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGc < 3:31424/149‑1 (MQ=255) ggCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCg < 7:97363/148‑1 (MQ=255) gCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGAc > 4:385529/1‑149 (MQ=255) gCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGAc > 2:196618/1‑149 (MQ=255) gCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTCCGGCCCGACT‑CGAAGATCGACGACGGCAACTTTGACGGTCACCTGGTCGGCATCCTGCAACAGGCCGAc > 2:332232/1‑149 (MQ=255) ccGGACCTGGGCATCCACGAGCAGTTGCTGCTCGCCCCCCGCCTGTTCCGCCGTACCCCCGCCTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGCCGGTGACCTGGTCGGCAGCCGGCAACAGGCCGACGc > 7:44836/1‑149 (MQ=255) ccGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGc > 6:368738/1‑149 (MQ=255) ggACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGccc < 7:16434/149‑1 (MQ=255) ggACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGccc > 2:88903/1‑149 (MQ=255) aCCTGGGCATCCACGAGCAGTTGCTGCTCGTCCCCAGACTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCcgc > 1:36112/1‑149 (MQ=255) aCCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCcgc > 7:140585/1‑149 (MQ=255) cTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGcaccttcagcaggtagtcgggg > 4:383613‑M1/1‑55 (MQ=255) cTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGcaccttcagcaggtagtcgggg < 3:383613‑M1/77‑23 (MQ=255) tCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCaa < 5:399447/149‑1 (MQ=255) gCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTgg < 1:196618/149‑1 (MQ=255) cAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACggg < 5:303996/138‑1 (MQ=255) cAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACggg > 6:303996/1‑138 (MQ=255) aGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGAAT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAAACGTGGtt > 7:381731/1‑149 (MQ=255) ttGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTgc < 6:323670/149‑1 (MQ=255) ttGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTgc > 1:148949/1‑149 (MQ=255) gctCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCACGCGACGGGCAAATCGTGGTTGCGCGcc > 4:403497/1‑149 (MQ=255) ctCGACCCCATCCTGTTCCGCCGTACTCCCGACTACCTGCTGAAGGTGGGGTGCTACT‑CGATGATCGACTACGGCATCTTTGACGGTGACCTGGTGGGGATCCTGCAACAGGCATACGCCCGCGACGGGCAAATCGTGTTTGCGCGCCt < 4:215202/149‑1 (MQ=255) ctCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGG‑TGCGCGCCt < 7:347461/148‑1 (MQ=255) cAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGc > 1:44895/1‑148 (MQ=255) cAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGc > 2:211425/1‑148 (MQ=255) ccTGTTCCGACGTACCCCCGACTACCTGCTGAAGGTGcgggggtacggcggaacaggctggggtagagcagcctctgctcgtggatgcccaggtccgcgccgatggggccccccgccgccacctggcccagaacgcgtatttcgaggat < 2:58609‑M2/149‑113 (MQ=255) ccgccgTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACTCCGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGCGAAGTGAc > 1:303342/1‑148 (MQ=255) cgTACCCCCGACTACCTGCTGAAGGTGCGGGGCGTCT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGTCAAATCGTGGTTGCGCGCCTGGTCGGCGAAGTGACCATCaa < 2:36112/149‑1 (MQ=255) ccccGCCTCCCGTCTGAAGGTGCGGGGCGACG‑CGATGATCGACGACTGCAGCTTTGACGGTGACCTGGGCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGCGAAGTGACCATCAAACGcc < 8:44836/149‑1 (MQ=255) ccccGACTACCTGCTGAAGGTGcgggggtacggcggaacaggctggggtcgagcagcaactgctcgtggatgcccag < 3:383613‑M2/77‑56 (MQ=255) ccccGACTACCTGCTGAAGGTGcgggggtacggcggaacaggctggggtcgagcagcaactgctcgtggatgcccag > 4:383613‑M2/1‑22 (MQ=255) ccccGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCACCTGGACGGCGAAGTGACCATCAAACGcc > 7:60370/1‑149 (MQ=255) cccGcaccttcagcaggtagtcgggggtacggcggaacaggctggggtcgagcagcaactgctcgtggatgcccaggtccgggccgatgggggcacccgccgccacctggcccagcacgggtatttcgaggatttccggccggcgcagc > 7:11905‑M1/1‑4 (MQ=255) ccGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGCGAAGTGACCATCAAACGCCTg > 3:203182/1‑149 (MQ=255) gACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGCGAAGTGACCATCAAACGCCTGc > 5:217638/1‑148 (MQ=255) | TACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTCCGCCGTACCCCCGACTACCTGCTGAAGGTGCGGGGCGACT‑CGATGATCGACGACGGCATCTTTGACGGTGACCTGGTCGGCATCCTGCAACAGGCCGACGCCCGCGACGGGCAAATCGTGGTTGCGCGCCTGGACGGCGAAGTGACCATCAAACGCCTGC > NC_002947/3525751‑3526041 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |