New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3884242	49 (0.680)	3 (0.040)	3/254	NT	5.9%	coding (127/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
	?	NC_002947	= 3884269	50 (0.740)					coding (154/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase

GCCACCCTGAAGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGCCCATCGTGCTGCTGACCCAGGGCGCC  >  NC_002947/3884094‑3884388                                                                                                                                                      |                                                                                                                                                   gCCACCCTGAAGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACC                                                                                                                                                    >  1:393348‑M1/1‑149 (MQ=255)   cACCCTGAAGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTg                                                                                                                                                  >  5:284534/1‑149 (MQ=255)   cACCCTGAAGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTg                                                                                                                                                  >  8:246276/1‑149 (MQ=255)     cccTGAAGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACGCTCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGc                                                                                                                                                 <  1:120195/149‑1 (MQ=255)      ccTGAAGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAg                                                                                                                                               >  4:42051/1‑149 (MQ=255)          aaGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGgcgc                                                                                                                                           <  7:40995/149‑1 (MQ=255)           aGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGgcgc                                                                                                                                           <  8:228149/148‑1 (MQ=255)           aGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGgcgc                                                                                                                                           <  8:221962/148‑1 (MQ=255)               gagTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCt                                                                                                                                       >  7:303264/1‑148 (MQ=255)               gagTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTg                                                                                                                                      >  6:442770/1‑149 (MQ=255)               gagTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTg                                                                                                                                      >  8:31259/1‑149 (MQ=255)               gagTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TAAGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTg                                                                                                                                      >  2:347293/1‑149 (MQ=255)                  tCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGAcc                                                                                                                                   <  8:303264/149‑1 (MQ=255)                  tCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCATTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGAcc                                                                                                                                   >  1:296987/1‑149 (MQ=255)                          gCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGgcg                                                                                                                            >  7:309327/1‑148 (MQ=255)                                  gTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGggttgg                                                                                                                   >  5:442770‑M2/1‑143 (MQ=255)                                      gcgcTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCGGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCctgcgccctcggtcagacgcgcctgcaggttggcaag                                                                                                               <  1:140017‑M1/149‑38 (MQ=255)                                        gcTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTACGCGGTCGACCCTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCa                                                                                                             <  3:243619/149‑1 (MQ=255)                                          tGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTTTCTTCCGCCGGCATCAACTGCCTCTGCGCGGTGGACCTTGCCAAGCTTCAGGCGCGTCTGTGCGAGGGCGCAGGGTTGGCGATCAtt                                                                                                           <  3:172561/149‑1 (MQ=255)                                            gATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGc                                                                                                         <  1:377745/149‑1 (MQ=255)                                            gATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGc                                                                                                         <  7:31259/149‑1 (MQ=255)                                             aTGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGcc                                                                                                        <  3:42051/149‑1 (MQ=255)                                             aTGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGcc                                                                                                        <  7:366510/149‑1 (MQ=255)                                                 aCGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTCTCTTCCGCCGGCATCAACAGCCTCTGCCCGGTCGACCTTGCCAACCTGCAGGCGCCTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGc                                                                                                    >  8:358937/1‑149 (MQ=255)                                                          gATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTc                                                                                            <  8:149311/148‑1 (MQ=255)                                                           aTCCTCGCACCGCGACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCa                                                                                           <  2:296987/148‑1 (MQ=255)                                                           aTCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCa                                                                                           <  6:402386/148‑1 (MQ=255)                                                            tCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCCACCTTGCCAAACTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGc                                                                                         >  7:304455/1‑149 (MQ=255)                                                                 gCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAgg                                                                                    <  8:226400/149‑1 (MQ=255)                                                                  cACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGc                                                                                   <  6:406223/149‑1 (MQ=255)                                                                      gCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCaa                                                                               <  2:412426/149‑1 (MQ=255)                                                                       ccACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGACCCAAg                                                                              <  8:101632/149‑1 (MQ=255)                                                                           aaCTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAg                                                                              >  7:6073/1‑145 (MQ=255)                                                                           aaCTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAg                                                                              <  8:6073/145‑1 (MQ=255)                                                                            aCTGGCGTCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACtt                                                                         <  6:90784/149‑1 (MQ=255)                                                                                gcggcgGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTtgct                                                                     <  2:421879/149‑1 (MQ=255)                                                                                gcggcgGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTtg                                                                       <  5:260623/147‑1 (MQ=255)                                                                                 cggcggATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCctgcgccctcggtcagacgcgcctgcaggttggcaa                                                                                                                >  4:394845‑M1/1‑69 (MQ=255)                                                                                 cggcggATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCctgcgccctcggtcagacgcgcctgcaggttggcaa                                                                                                                <  3:394845‑M1/105‑37 (MQ=255)                                                                                  ggctgATACCTCACG‑TCTGTTGGCTTCCGCCGGCATCTACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCGAAGGCCCAAGCACTTtgctgc                                                                   <  2:393348/149‑1 (MQ=255)                                                                                                g‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGAc                                                     >  7:15066/1‑149 (MQ=255)                                                                                                      ttgtCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGc                                                 >  6:439460/1‑148 (MQ=255)                                                                                                        gtCTTCCGCCGGCATCAACAGCCTCTGCGCGGTTGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAAc                                              >  6:422742/1‑149 (MQ=255)                                                                                                           ttCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGa                                           >  4:45708/1‑149 (MQ=255)                                                                                                             ccgccgGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAg                                          <  5:439460/148‑1 (MQ=255)                                                                                                                   gCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCTGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCg                                   >  3:525/1‑149 (MQ=255)                                                                                                                      tCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGAt                                <  6:284534/149‑1 (MQ=255)                                                                                                                       cAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGAtt                               >  1:63403/1‑149 (MQ=255)                                                                                                                        aaCAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGAttt                              >  8:2204/1‑149 (MQ=255)                                                                                                                        aaCAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGAttt                              >  7:366784/1‑149 (MQ=255)                                                                                                                         aCAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTg                             <  1:347293/149‑1 (MQ=255)                                                                                                                          cAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGc                            <  8:309327/149‑1 (MQ=255)                                                                                                                                 tGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGCCCATc                       <  8:15066/147‑1 (MQ=255)                                                                                                                                   cgcgGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCAt                                                                                                            >  2:76123/1‑60 (MQ=255)                                                                                                                                   cgcgGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCAt                                                                                                            <  1:76123/60‑1 (MQ=255)                                                                                                                                   cgcgGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGCCCATCGtgc                   >  3:307220/1‑149 (MQ=255)                                                                                                                                    gcgGTCGCCCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCTGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGCCCATCGtgct                  <  8:304455/149‑1 (MQ=255)                                                                                                                                            ccTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGCCCATCGTGCTGCTGAcc           >  1:212593/1‑148 (MQ=255)                                                                                                                                             cTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGggttggcaaggtcgaccgcgcagaggctgttgatgccggccgaagacaacagacgtgaggtatccgccgccagttgtggcggtgcgaggatcaaggcacgttcatccagcgc         <  1:140017‑M2/149‑113 (MQ=255)                                                                                                                                              ttGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGggttggcaaggtcgaccgcgcagaggctgttgatgccggcggaagacaacagacgtgaggtatccgccg                                                    >  4:394845‑M2/1‑36 (MQ=255)                                                                                                                                              ttGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGggttggcaaggtcgaccgcgcagaggctgttgatgccggcggaagacaacagacgtgaggtatccgccg                                                    <  3:394845‑M2/105‑70 (MQ=255)                                                                                                                                                 ccAACCctgcgccctcggtcagacgcgcctgcaggttggcaaggtcgaccgcgcagaggctgttgatgccggcggaagacaacagacgtgaggtatccgccgccagttgtggcggtgcgaggatcaaggcacgttcatccagcgccaac     >  5:442770‑M1/1‑6 (MQ=255)                                                                                                                                                    aCCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGCCCATCGTGCTGCTGACCCAGGGCGcc  >  6:169505/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GCCACCCTGAAGGAGAGTCGTTTTGGCCAGTTCGTTGGCGCTGGATGAACGTGCCTTGATCCTCGCACCGCCACAACTGGCGGCGGATACCTCACG‑TCTGTTGTCTTCCGCCGGCATCAACAGCCTCTGCGCGGTCGACCTTGCCAACCTGCAGGCGCGTCTGACCGAGGGCGCAGGGTTGGCGATCATTGCCGAGCAGGTGTTCAGCCAAGGCCCAAGCACTTTGCTGCAGGCATTCATCGACCAGCAACCGAGCTGGTCGGATTTGCCCATCGTGCTGCTGACCCAGGGCGCC  >  NC_002947/3884094‑3884388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.