New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6055813 =71 (0.990)4 (0.060) 4/244 NT 6.1% intergenic (+34/‑61) tonB/oxyR TonB energy transducing system subunit TonB/oxidative and nitrosative stress transcriptional dual regulator
?NC_002947 6055876 = 59 (0.910)coding (3/927 nt) oxyR oxidative and nitrosative stress transcriptional dual regulator

CCTGGAAATGATCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCACGTGAGCCAAC  >  NC_002947/6055668‑6055961
                                                                                                                                                 |                                                                                                                                                     
ccTGGAAATGATCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATaa                                                                                                                                                    >  8:345241/1‑149 (MQ=255)
ccTGGAAATGATCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATaa                                                                                                                                                    >  4:101538/1‑149 (MQ=255)
 tcgaagatcagaacgccaagctcgtcctcgagcttcttcacaccgacctacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAAc                                                                                                                                                   >  7:232815‑M1/145‑149 (MQ=255)
 tcgaagatcagaacgccaagctcgtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgatgtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAAc                                                                                                                                                   <  5:424260‑M1/5‑1 (MQ=255)
 tcgaagatcagaacgccaagctcgtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAAc                                                                                                                                                   <  8:293385‑M1/5‑1 (MQ=255)
   gaagatcagaacgccaagctcgtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAAc                                                                                                                                                   >  1:421863‑M1/143‑147 (MQ=255)
   gaagatcagaacgccaagctcgtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGt                                                                                                                                                 >  5:104286‑M1/143‑149 (MQ=255)
   gaagatcagaacgccaagctagacctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGt                                                                                                                                                 <  4:26628‑M1/7‑1 (MQ=255)
     agatcagaacgccaagctcgtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGc                                                                                                                                               >  8:45900‑M1/141‑149 (MQ=255)
       aTGATCCGTCGGGCCGGTACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGt                                                                                                                                             <  1:75512/149‑1 (MQ=255)
       aTGATCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGc                                                                                                                                               <  2:204818/147‑1 (MQ=255)
       aTGATCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGc                                                                                                                                               >  1:204818/1‑147 (MQ=255)
        tcagaacgccaagctcgtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGCGTc                                                                                                                                            <  4:136445‑M1/12‑1 (MQ=255)
         cagaacgccaagctcgtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcttggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGCGTc                                                                                                                                            <  2:269805‑M1/12‑1 (MQ=255)
          aTCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCt                                                                                                                                           <  5:332624/148‑1 (MQ=255)
          aTCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTa                                                                                                                                          >  6:270137/1‑149 (MQ=255)
           tCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTAt                                                                                                                                         <  1:301835/149‑1 (MQ=255)
              gTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGa                                                                                                                                      >  7:365844/1‑149 (MQ=255)
                     cGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTAAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGc                                                                                                                               >  1:102948/1‑149 (MQ=255)
                       gCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTTGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCg                                                                                                                             <  7:285069/149‑1 (MQ=255)
                       gCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCg                                                                                                                             <  7:345241/149‑1 (MQ=255)
                        gtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAAc                                                                                                                                                   >  4:270926‑M1/122‑126 (MQ=255)
                        gtcctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAAc                                                                                                                                                   <  3:270926‑M1/5‑1 (MQ=255)
                           ctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGCGTc                                                                                                                                            >  5:154867‑M1/119‑130 (MQ=255)
                           ctcgagcttcttcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGCGTc                                                                                                                                            <  6:154867‑M1/12‑1 (MQ=255)
                                ccAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTgg                                                                                                                    <  2:143655/149‑1 (MQ=255)
                                ccAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTgg                                                                                                                    >  4:246879/1‑149 (MQ=255)
                                ccAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTgg                                                                                                                    >  4:240934/1‑149 (MQ=255)
                                 cAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTggg                                                                                                                   <  4:53116/149‑1 (MQ=255)
                                  aaGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGc                                                                                                                  >  5:38973/1‑149 (MQ=255)
                                  aaGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGc                                                                                                                  >  3:243146/1‑149 (MQ=255)
                                    gccgccACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGccc                                                                                                                <  2:108102/149‑1 (MQ=255)
                                     ccgccACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGccc                                                                                                                >  7:387631/1‑148 (MQ=255)
                                      tcacaccgaccgacagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggctagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCg                                                                                                               <  6:209713‑M1/41‑1 (MQ=255)
                                       gccACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCa                                                                                                             <  3:427133/149‑1 (MQ=255)
                                       gccACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCa                                                                                                             <  5:387356/149‑1 (MQ=255)
                                          aCCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACt                                                                                                          <  6:411338/149‑1 (MQ=255)
                                          aCCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACt                                                                                                          >  6:424260/1‑149 (MQ=255)
                                               aGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATg                                                                                                     <  5:270137/149‑1 (MQ=255)
                                                 ttGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGa                                                                                                   <  3:240934/149‑1 (MQ=255)
                                                   gCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACg                                                                                                 >  4:125688/1‑149 (MQ=255)
                                                   gCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACg                                                                                                 >  2:270175/1‑149 (MQ=255)
                                                   gCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTACTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGCACg                                                                                                 >  5:347682/1‑149 (MQ=255)
                                                   cagggtgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggctagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACg                                                                                                 >  5:209713‑M1/95‑149 (MQ=255)
                                                       gtgggttggctgacgtgactgcgctctgctgcttggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaaggttcATAACGTGCGTCTATCGATTGCAGGCGCTATGCTGGGCCCGCAACTTCATGGACGCACg                                                                                             >  8:259136‑M1/91‑149 (MQ=255)
                                                       aaCAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCa                                                                                               <  6:38973/147‑1 (MQ=255)
                                                       aaCAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCAc                                                                                              <  8:365844/148‑1 (MQ=255)
                                                        tgggttggctcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGt                                                                                            >  2:295177‑M1/90‑149 (MQ=255)
                                                           attgCACGTTTGCATTCGTGGCACCGTTCGTTTACTCACTGGACCCCCGCTAACACTTTTGCTTCTGTCACAATTCGGCAATTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCACCAACTTCATGGACGCACGTTAt                                                                                         <  7:273680/146‑1 (MQ=255)
                                                           aTGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTAt                                                                                         >  5:107582/1‑149 (MQ=255)
                                                            gggCACGATTGAAGTCGTGGCACCGGTCGTCTACTCACTGGACCGCCGCTACGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATg                                                                                        <  7:79194/148‑1 (MQ=255)
                                                              gCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGAc                                                                                      >  1:24924/1‑149 (MQ=255)
                                                               cACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGAcc                                                                                     >  4:52193/1‑149 (MQ=255)
                                                               cACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGAcc                                                                                     >  3:240871/1‑149 (MQ=255)
                                                                aCGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGAccc                                                                                    <  4:264224/149‑1 (MQ=255)
                                                                 tcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATaa                                                                                                                                                    <  1:155433‑M1/4‑1 (MQ=255)
                                                                 tcacgtgacagcgctcggcggcatggccgaagtgctgttcctgggcgagtgtgacgatgtagcgtaattctgtaagggtcATaa                                                                                                                                                    >  2:155433‑M1/81‑84 (MQ=255)
                                                                      gAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCATCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTa                                                                                 >  7:207904/1‑146 (MQ=255)
                                                                             tGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACg                                                                       <  1:270175/149‑1 (MQ=255)
                                                                             tGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACg                                                                       <  4:127522/149‑1 (MQ=255)
                                                                                       cGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCATCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGt                                                              <  3:246879/148‑1 (MQ=255)
                                                                                        gTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTca                                                            >  1:299463/1‑149 (MQ=255)
                                                                                          cTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCCCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTcaca                                                          >  1:355473/1‑149 (MQ=255)
                                                                                                aCTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGcc                                                    >  5:31974/1‑149 (MQ=255)
                                                                                                aCTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGcc                                                    >  6:174250/1‑149 (MQ=255)
                                                                                                 cTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGccc                                                   <  2:355473/149‑1 (MQ=255)
                                                                                                  tGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGcc                                                    >  1:269805/1‑147 (MQ=255)
                                                                                                   ggACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAg                                                 >  5:229350/1‑149 (MQ=255)
                                                                                                    gACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCa                                                  <  2:299463/147‑1 (MQ=255)
                                                                                                       cgccgcTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGaa                                             >  4:159969/1‑148 (MQ=255)
                                                                                                       cgccgcTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGaa                                             >  1:54827/1‑148 (MQ=255)
                                                                                                             tAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCa                                                  <  8:85665/138‑1 (MQ=255)
                                                                                                             tAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCa                                                  >  7:85665/1‑138 (MQ=255)
                                                                                                                 aCTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCgg                                  >  8:136341/1‑149 (MQ=255)
                                                                                                                   ttttGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGt                                                              <  6:296926/120‑1 (MQ=255)
                                                                                                                   ttttGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGt                                                              >  5:296926/1‑120 (MQ=255)
                                                                                                                   ttttGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGc                                 >  3:136445/1‑148 (MQ=255)
                                                                                                                     ttGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCAt                              >  2:187434/1‑149 (MQ=255)
                                                                                                                       gCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATgc                            >  2:279291/1‑149 (MQ=255)
                                                                                                                           cTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATgccgcc                        >  7:319753/1‑149 (MQ=255)
                                                                                                                                  taTTAGGCAATTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCTCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTTCATCGTCACTCTCGCGCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCt                 <  6:347682/148‑1 (MQ=255)
                                                                                                                                  aaTTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCt                 >  5:132316/1‑149 (MQ=255)
                                                                                                                                  aaTTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCt                 >  1:186186/1‑149 (MQ=255)
                                                                                                                                  aaTTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCt                 <  2:21188/149‑1 (MQ=255)
                                                                                                                                  aaTTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCt                 >  3:82749/1‑149 (MQ=255)
                                                                                                                                  aaTTCGGCAAGTCTGATAACGTGCGTCTATCGATTACAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCt                 >  8:11160/1‑149 (MQ=255)
                                                                                                                                    ttCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGt               >  3:314459/1‑149 (MQ=255)
                                                                                                                                      cGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTc              <  2:54827/148‑1 (MQ=255)
                                                                                                                                       ggCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAAACAGCACTTCGGCCATGCCGCCGAGCGCTGTc              <  1:279291/148‑1 (MQ=255)
                                                                                                                                       ggCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCAc            <  8:387631/149‑1 (MQ=255)
                                                                                                                                           aGTCTGATAACGTGCGTCTATCGATTACAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCACGTGa        <  7:11160/149‑1 (MQ=255)
                                                                                                                                           aGTCTGATAACGTGCGTCTATCGAGTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCACGTGa        <  8:159131/149‑1 (MQ=255)
                                                                                                                                              cTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGaa                                             >  3:67399/1‑109 (MQ=255)
                                                                                                                                              cTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGaa                                             <  4:67399/109‑1 (MQ=255)
                                                                                                                                                 ATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCACGTGAGCCa    >  2:186186‑M1/1‑147 (MQ=255)
                                                                                                                                                 ATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCACGTGAGCCa    >  4:82749‑M1/1‑147 (MQ=255)
                                                                                                                                                 ATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCACGTGAGCCAac  <  5:192382‑M1/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
CCTGGAAATGATCCGTCGGGCCGGCACGGTACCCAAGCCGCCACCCGAGTTGCTGAACAATGGCACGATTGAAGTCGTGGCACCGTTCGTCTACTCACTGGACCGCCGCTAAGACTTTTGCTTCTGTCACAATTCGGCAAGTCTGATAACGTGCGTCTATCGATTGCAGCCGCTATGCTGGGCCCGCAACTTCATGGACGCACGTTATGACCCTTACAGAATTACGCTACATCGTCACACTCGCCCAGGAACAGCACTTCGGCCATGCCGCCGAGCGCTGTCACGTGAGCCAAC  >  NC_002947/6055668‑6055961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.