New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3433953 =	73 (1.020)	5 (0.070)	5/254	NT	7.6%	coding (105/603 nt)	gpV	tail spike protein
	?	NC_002947	3434003 =	53 (0.780)					coding (155/603 nt)	gpV	tail spike protein

ACCCGACTGCGCAGCATGACCGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACCGCGACCATGTCGAGGTGT  >  NC_002947/3433856‑3434149                                                                                                                                                      |                                                                                                                                                   aCCCGACTGCGCAGCATGACCGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCAATGGCTGCCgg                                                                                                                                                    >  1:367345/1‑148 (MQ=255)   gccccggcacaaatgtgccctgggcagggtcaccgctcgggctgatcagcgcgccctgctcgcccaggcttggcgaccgccaatggcgggccttgcCGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCa                                                                                                                                                  >  5:426654‑M1/97‑149 (MQ=255)   ccGACTGCGCAGCATGACCGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGc                                                                                                                                                   >  3:121637/1‑147 (MQ=255)   ccGACTGCGCAGCATGACCGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGc                                                                                                                                                   >  5:13104/1‑147 (MQ=255)             agcaTGACCGGATGATTTCCGACCAGGTGATTCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCa                                                                                                                                        >  1:40979/1‑149 (MQ=255)                 tGACCGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGc                                                                                                                                   <  6:337088/149‑1 (MQ=255)                   aCCGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCg                                                                                                                                  <  6:13104/148‑1 (MQ=255)                    ccGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGt                                                                                                                                >  4:192005/1‑149 (MQ=255)                      ggATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCg                                                                                                                              >  6:379771/1‑149 (MQ=255)                       gatgatTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGc                                                                                                                             <  3:309079/149‑1 (MQ=255)                         tgatTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCa                                                                                                                           <  6:369157/149‑1 (MQ=255)                                 gACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTggg                                                                                                                   >  8:383103/1‑149 (MQ=255)                                       gTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCa                                                                                                             <  4:121637/149‑1 (MQ=255)                                         gA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAgg                                                                                                           >  2:293963/1‑149 (MQ=255)                                          a‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAgg                                                                                                           <  2:248121/148‑1 (MQ=255)                                          a‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAgg                                                                                                           <  1:438141/148‑1 (MQ=255)                                              aaGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAgggtca                                                                                                       >  8:290665/1‑146 (MQ=255)                                                ggggTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGgcgcgc                                                                                                     <  1:293963/149‑1 (MQ=255)                                                      tgtgGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGAt                                                                                                 >  3:242680/1‑147 (MQ=255)                                                        tgGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGc                                                                                             >  2:432972/1‑149 (MQ=255)                                                        tgGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGc                                                                                             >  4:285292/1‑149 (MQ=255)                                                        tgGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGAAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGc                                                                                             >  1:386253/1‑149 (MQ=255)                                                               cGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCg                                                                                      <  8:16681/149‑1 (MQ=255)                                                                gTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCgg                                                                                     >  1:41166/1‑149 (MQ=255)                                                                    aCTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGAc                                                                                 <  1:30163/149‑1 (MQ=255)                                                                     cTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGAcc                                                                                >  8:339245/1‑149 (MQ=255)                                                                      ttGATGGCCGAGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGAccc                                                                               >  5:404857/1‑149 (MQ=255)                                                                        gATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCATCGGGTGAAGTGCCATGCACTGGCTGCCGGCAAGGCCCGCCATTGCCGGTCGCCAAGCCTGGCCCAGCAGGCCGCCCTGAACAGCCCCAGCGGTGACCCt                                                                              >  1:108357/1‑149 (MQ=255)                                                                            gCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCTGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGccc                                                                          <  1:66065/148‑1 (MQ=255)                                                                             ccGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAg                                                                        <  4:242680/149‑1 (MQ=255)                                                                              cGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGc                                                                                       >  5:166901/1‑133 (MQ=255)                                                                              cGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGc                                                                                       <  6:166901/133‑1 (MQ=255)                                                                                    gCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGcaca                                                                  <  8:45204/148‑1 (MQ=255)                                                                                    gCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACAt                                                                 <  1:159382/149‑1 (MQ=255)                                                                                       gcgcATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTtg                                                              >  1:216593/1‑149 (MQ=255)                                                                                        cgcATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTtgt                                                             <  5:379771/149‑1 (MQ=255)                                                                                        cgcATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTtg                                                              <  2:25775/148‑1 (MQ=255)                                                                                         gcATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGACCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTtgtg                                                            >  3:304925/1‑149 (MQ=255)                                                                                          cATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGTTGACCCTGCCCAGGGCACATTTGTGc                                                           <  2:386253/149‑1 (MQ=255)                                                                                               cggacggCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCgggg                                                      <  2:40979/149‑1 (MQ=255)                                                                                                 tgccggcagccagtgcatgccacttcacccatgcactgacccagtcgctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGc                                                     >  5:426654‑M2/54‑149 (MQ=255)                                                                                                 gacggCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCC‑CGGCACAAATGTGccctgggca                                                   <  2:363819/149‑8 (MQ=255)                                                                                                   CGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGt                                                  >  3:192005‑M1/1‑149 (MQ=255)                                                                                                   CGGAAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTg                                                   <  7:379320‑M1/148‑1 (MQ=255)                                                                                                    cggcagccagtgcatgccacttcacccatgcactgacccagtcgctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTg                                                   >  5:310014‑M2/51‑148 (MQ=255)                                                                                                       AGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGTCGGGGCTGTACgg                                              >  2:367345‑M1/1‑149 (MQ=255)                                                                                                       AGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACgg                                              <  3:98791‑M1/149‑1 (MQ=255)                                                                                                         gccagtgcatgccacttcacccatgcactgacccagtcgctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACgg                                              >  7:4794‑M2/46‑148 (MQ=255)                                                                                                          gACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCaa                                           <  2:41166/149‑1 (MQ=255)                                                                                                            agtgcatgccacttcacccatgcactgacccagtcgctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAAt                                          <  6:310014‑M2/107‑1 (MQ=255)                                                                                                              gggTCAGTGCAT‑GGGTGAAGTGGCATGTACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGcc                                       >  4:338011/1‑149 (MQ=255)                                                                                                               ggTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCg                                      >  6:175166/1‑149 (MQ=255)                                                                                                               ggTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCg                                      >  5:389756/1‑149 (MQ=255)                                                                                                                gTCAGTGCAT‑GGGTGAAGTGTCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGTCGATCAGGGCGCGCTGATCAGCCCGAGCGTTGACCCTGCCTAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCgg                                     <  5:91404/149‑1 (MQ=255)                                                                                                                 tCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGc                                    >  8:77030/1‑149 (MQ=255)                                                                                                                 tCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGc                                    <  7:339245/149‑1 (MQ=255)                                                                                                                    gTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCg                                 >  6:230881/1‑149 (MQ=255)                                                                                                                      acttcacccatgcactgacccagtcgctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGc                                <  6:426654‑M2/117‑1 (MQ=255)                                                                                                                       cAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAg                                                                        >  6:6787/1‑107 (MQ=255)                                                                                                                       cAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAg                                                                        <  5:6787/107‑1 (MQ=255)                                                                                                                       cAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTAc                                                <  2:112294/131‑1 (MQ=255)                                                                                                                       cAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTAc                                                >  1:112294/1‑131 (MQ=255)                                                                                                                            ggTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCgg                          <  6:404857/149‑1 (MQ=255)                                                                                                                            ggTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCg                           >  8:195848/1‑148 (MQ=255)                                                                                                                             gTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGa                         >  7:362359/1‑149 (MQ=255)                                                                                                                                     gCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACcgc                  >  6:278478/1‑148 (MQ=255)                                                                                                                                            cTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACCGCGACCATGt          <  8:379320/149‑1 (MQ=255)                                                                                                                                               gctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCgggg                                                      <  8:152687‑M2/95‑1 (MQ=255)                                                                                                                                               gctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCgggg                                                      >  7:152687‑M2/8‑102 (MQ=255)                                                                                                                                                ctgccgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACCGCGACCATGTCGAg      <  8:362359‑M2/143‑1 (MQ=255)                                                                                                                                                    cgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACCGCGa                >  4:227792‑M2/3‑135 (MQ=255)                                                                                                                                                    cgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACCGCGa                <  3:227792‑M2/133‑1 (MQ=255)                                                                                                                                                    cgGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACCGCGACCATGTCGAGgtgt  <  6:389756‑M2/147‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   ACCCGACTGCGCAGCATGACCGGATGATTTCCGACCAGGTGA‑TCAAGGGGTATGTGGTAGCCGTGGACTTGATGGCCGGGAGGCTGCGCATGACGGACGGCAGCGACTGGGTCAGTGCAT‑GGGTGAAGTGGCATGCACTGGCTGCCGGCAAGGCCCGCCATTGGCGGTCGCCAAGCCTGGGCGAGCAGGGCGCGCTGATCAGCCCGAGCGGTGACCCTGCCCAGGGCACATTTGTGCCGGGGCTGTACGGCAATGCCGGCCCGCAGCCGGACAACCGCGACCATGTCGAGGTGT  >  NC_002947/3433856‑3434149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.