New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3911503	64 (0.890)	4 (0.060)	4/248	NT	6.1%	coding (813/840 nt)	PP_3451	hypothetical protein
	?	NC_002947	= 3911534	65 (0.980)					intergenic (+4/‑121)	PP_3451/PP_3452	hypothetical protein/GGDEF domain‑containing protein

GTTCCGCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGCCCACATA  >  NC_002947/3911392‑3911681                                                                                                                                               |                                                                                                                                                    gTTCCGCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAcca                                                                                                                                                  <  7:219588‑M2/146‑4 (MQ=255) gTTCCGCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAcca                                                                                                                                                  >  8:219588‑M2/1‑143 (MQ=255)    ccGCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccg                                                                                                                                            <  3:12937‑M2/149‑10 (MQ=255)    ccGCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccg                                                                                                                                            <  2:341793‑M2/149‑10 (MQ=255)     cGCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccgg                                                                                                                                           >  8:137818‑M2/1‑139 (MQ=255)      gCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGggccggc                                                                                                                                          >  7:124254/1‑149 (MQ=255)            tGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGggccggc                                                                                                                                          >  5:163714/1‑143 (MQ=255)            tGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGggccggc                                                                                                                                          <  6:163714/143‑1 (MQ=255)              aGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTcgc                                                                                                                                  <  3:28775/149‑1 (MQ=255)               gcgcgcCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTcgcg                                                                                                                                 <  4:358021/149‑1 (MQ=255)                cgcgcCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccgg                                                                                                                                           <  7:138751‑M2/138‑11 (MQ=255)                cgcgcCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccgg                                                                                                                                           >  8:138751‑M2/1‑128 (MQ=255)                   gcCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCAGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGAt                                                                                                                              >  6:123017/1‑148 (MQ=255)                        aGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAAcc                                                                                                                         >  5:312518/1‑148 (MQ=255)                          cAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCcac                                                                                                                      <  2:149401/149‑1 (MQ=255)                          cAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCcac                                                                                                                      <  4:4675/149‑1 (MQ=255)                               gTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTc                                                                                                                 >  8:218000/1‑149 (MQ=255)                               gTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTc                                                                                                                 >  4:9070/1‑149 (MQ=255)                                tttCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTcc                                                                                                                <  6:311743/149‑1 (MQ=255)                                   cGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTccccc                                                                                                             >  4:122755/1‑149 (MQ=255)                                         gAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCg                                                                                                       >  2:123705/1‑149 (MQ=255)                                          cgCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCg                                                                                                       >  3:272218/2‑148 (MQ=255)                                          aGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGt                                                                                                      <  5:305508/149‑1 (MQ=255)                                            cccGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTAc                                                                                                    <  2:78774/149‑1 (MQ=255)                                              cgccgAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACgg                                                                                                  >  8:291227/1‑149 (MQ=255)                                               gccgAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGt                                                                                                 <  3:2794/149‑1 (MQ=255)                                                 cgAGCCCAGGGGGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTcc                                                                                               <  7:326094/149‑1 (MQ=255)                                                  gAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTccc                                                                                              <  1:123705/149‑1 (MQ=255)                                                        aGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCgg                                                                                                                                >  5:272320/1‑109 (MQ=255)                                                        aGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCgg                                                                                                                                <  6:272320/109‑1 (MQ=255)                                                             gggtAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCgg                                                                                   >  6:325161/1‑149 (MQ=255)                                                              ggtAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCggg                                                                                  <  5:405773/149‑1 (MQ=255)                                                                      gTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCcg                                                                          <  5:325161/149‑1 (MQ=255)                                                                      gTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCcg                                                                          <  4:12937/149‑1 (MQ=255)                                                                       tGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCcgc                                                                         <  3:256482/149‑1 (MQ=255)                                                                         ccATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTAAACCcgctc                                                                       <  6:312518/149‑3 (MQ=255)                                                                          cATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGaa                                                                      >  7:205540/1‑149 (MQ=255)                                                                            tGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGTGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAg                                                                    <  1:341793/149‑1 (MQ=255)                                                                                     aGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCTGGTTTACCCGCGAAAGGTCCAAGcc                                                           >  7:130453/1‑149 (MQ=255)                                                                                     aGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGcc                                                           >  5:76178/1‑149 (MQ=255)                                                                                      gtgtTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCt                                                          <  6:76178/149‑1 (MQ=255)                                                                                           tGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGaaa                                                      <  4:272218/148‑1 (MQ=255)                                                                                           tGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGaaa                                                      >  7:262850/1‑148 (MQ=255)                                                                                            gCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGaaaa                                                     <  3:122755/148‑1 (MQ=255)                                                                                             ccTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAag                                                   >  3:212694/1‑149 (MQ=255)                                                                                                  cgcTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCTGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAagtagt                                               <  8:130453/148‑1 (MQ=255)                                                                                                  cgcTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAgtagta                                              <  5:299172/149‑1 (MQ=255)                                                                                                     tACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccggtagcgcaaggcaaacactgcctcggcatggcacccgctacccaccctgggctcggcgggctccgcccgaaacgcctgctccggcgcgctcacctgg                                           <  5:440954‑M2/149‑107 (MQ=255)                                                                                                     tACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGcc                                           >  6:316624/1‑149 (MQ=255)                                                                                                       ccGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccggtagcgcaaggcaaacactgcctcggcatggcacccgctacccaccctgggctcggcgggctccgcccgaaacgcctgatccggcgcgctcacctggcg                                         <  3:25302‑M2/149‑109 (MQ=255)                                                                                                       ccGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGACt                                          >  3:342553/1‑148 (MQ=255)                                                                                                        cGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTAccagggccggtagcgcaacgcaaacactgcctcggcatggcacccgctacccaccctgggctcggcgggctccccccgaaaccccagctccggcgccctcccctggcg                                         <  1:200330‑M2/148‑109 (MQ=255)                                                                                                        cGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCt                                          >  6:345039/1‑147 (MQ=255)                                                                                                        cGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCt                                          >  4:219580/1‑147 (MQ=255)                                                                                                         ggCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAag                                                   >  5:108324/1‑137 (MQ=255)                                                                                                         ggCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAag                                                   <  6:108324/137‑1 (MQ=255)                                                                                                          gCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAgg                                      <  8:124254/149‑1 (MQ=255)                                                                                                             cTGGGCCCGGGGTCTCATGCCCCCCCAATGAAGAACCCCGGCCGGCCTCGTCGCGGATCCACCCACAGGGCCCCCACCCCGTACGGCCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGc                                   <  8:85232/149‑1 (MQ=255)                                                                                                                 gCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCAc                               <  5:123017/149‑1 (MQ=255)                                                                                                                    cGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGc                                            >  1:341498/1‑133 (MQ=255)                                                                                                                    cGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGc                                            <  2:341498/133‑1 (MQ=255)                                                                                                                      gggTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATg                          <  2:420059/149‑1 (MQ=255)                                                                                                                      gggTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATg                          >  3:142366/1‑149 (MQ=255)                                                                                                                         tATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTAACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCAACGATGtt                        >  5:271618/1‑148 (MQ=255)                                                                                                                            cTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTc                       >  5:360781/1‑146 (MQ=255)                                                                                                                             ttGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGt                         <  4:87588/143‑1 (MQ=255)                                                                                                                             ttGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGt                         >  3:87588/1‑143 (MQ=255)                                                                                                                             ttGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGT‑CCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCaa                     >  7:121163/1‑146 (MQ=255)                                                                                                                             ttGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGT‑CCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCaa                     <  8:121163/146‑1 (MQ=255)                                                                                                                               gCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCCGATAAACCCACAGGACCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGCTCCAAGCCTGAAAAAGTAGTACCCACAGTACCACACCGATGTTCAAAAc                  >  6:302278/1‑148 (MQ=255)                                                                                                                                    aGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGa            <  4:142366/149‑1 (MQ=255)                                                                                                                                       aaTGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGGGCCCACCGATGTTCAAGACCATCGAAGc         >  5:259160/1‑149 (MQ=255)                                                                                                                                       aaTGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGc         <  6:360781/149‑1 (MQ=255)                                                                                                                                        aTGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGcc        >  4:354143/1‑149 (MQ=255)                                                                                                                                         tGAATTAccagggccggtagcggaaggcaaacagtgcctcggcatggcacccgctacccaccctggtctcggcgggctccgcccgaaacgcctgctccggcgcgctcacctggcggaacgcctcgcgcaccacacccacccggcacggc       >  2:200330‑M2/1‑7 (MQ=255)                                                                                                                                         tGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTCCCCGCGAAAGTTCGAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGacc       <  5:302278/149‑1 (MQ=255)                                                                                                                                          gAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATc              >  4:396516/1‑141 (MQ=255)                                                                                                                                          gAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATc              <  3:396516/141‑1 (MQ=255)                                                                                                                                          gAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGCCca      >  5:189833/1‑149 (MQ=255)                                                                                                                                            aTTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGCCcaca    <  7:218000/149‑1 (MQ=255)                                                                                                                                             ttACCAGGGCCGGCCTCTTCGCTGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGCCCACAt   <  3:100737/149‑1 (MQ=255)                                                                                                                                              tACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGCCCACATa  >  2:117910/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                    GTTCCGCCAGGTGAGCGCGCCGGAGCAGGCGTTTCGGGCGGAGCCCGCCGAGCCCAGGGTGGGTAGCGGGTGCCATGCCGAGGCAGTGTTTGCCTTGCGCTACCGGCCCTGGGCCCGGGGTATCTTGCCACAGCAATGAATTACCAGGGCCGGCCTCTTCGCGGATAAACCCACAGGTCCCCCACACCGTACGGTCCCTGTAGGAGCGGGTTTACCCGCGAAAGGTCCAAGCCTGAAAAAGTAGTAGCCTCAGGAGCCCACCGATGTTCAAGACCATCGAAGCCCACATA  >  NC_002947/3911392‑3911681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.