New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	186030 =	72 (1.380)	4 (0.080)	4/254	NT	6.0%	coding (109/522 nt)	PP_0162	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	186077 =	57 (1.150)					coding (62/522 nt)	PP_0162	ECF family RNA polymerase sigma‑70 factor

CTTGCTCCGCCAACAATGAGACTAATTATCATTAACGTCCATTGATGCCGGCGCCCTCCTCCATGCCCAGCAACGATTCCGTGCAAACGCTCTACAGTGACCACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/186182‑186030 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAACGCGTAAAGCCGGTAATG  >  NC_002947/186077‑186224                                                                                                                                                                                                                                                                                                               CTTGCTCCGCCAACAATGAGACTAATTATCATTAACGTCCATTGATGCCGGCGCCCTCCTCCATGCCCAGCAACGATTCCGTGCAAACGCTCTACAGTGACCACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCA                                                                                                                                                          >  7:230494/1‑149     CTCCGCAAACAATTAGACAAATTATCATTAACGTCCATTGATGCCGGCTCGCTCCTCCATGCCCAGCAACGATTCCGTGCAAACGCTCTACTGTGACCACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCTGCAACGCAGCC                                                                                                                                                       <  6:235232/148‑1                                                                                                    ACCACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTT                                                       >  5:152673/1‑149                                                                                                      CACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTAGG                                                     >  4:67854/1‑149                                                                                                         CACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTTATGATAATTAGTCTCATTGTTGGCG                                                   >  4:110262/1‑148                                                                                                          ACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGA                                                 <  6:152673/149‑1                                                                                                                                                         GTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGGTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAACGCGTAAAGCGGGTAATG  <  6:104365/149‑1                                                                                                                                                                                                                                                                                                               CTTGCTCCGCCAACAATGAGACTAATTATCATTAACGTCCATTGATGCCGGCGCCCTCCTCCATGCCCAGCAACGATTCCGTGCAAACGCTCTACAGTGACCACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/186182‑186030 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAACGCGTAAAGCCGGTAATG  >  NC_002947/186077‑186224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.