New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	186030 =	72 (1.380)	4 (0.080)	4/254	NT	6.0%	coding (109/522 nt)	PP_0162	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	186077 =	57 (1.150)					coding (62/522 nt)	PP_0162	ECF family RNA polymerase sigma‑70 factor

ACGCGCTACCGTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAACGCGTAAAGCCGGTAATG  >  NC_002947/185929‑186224                                                                                                                                                     |                                                                                                                                                    tccgccaacaatgagactaattatcattaacgtccattgatgccggcgccctcctccatgcccagcaacgattccgtgcaaacgctctacagtgaccaccaCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgt                                                                                                                                                     <  6:152673‑M1/48‑1 (MQ=255) aCGCGCTACCGTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgt                                                                                                                                                     >  1:79992/1‑149 (MQ=255)  cgcgCTACCGTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgtg                                                                                                                                                    <  4:272218/149‑1 (MQ=255)   gcgcTACCGTGCGCAGGAAGGCGGTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGAGGAAGGTATCCTGGGCGTTGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgtgg                                                                                                                                                   <  1:255057/149‑1 (MQ=255)   cgccaacaatgagactaattatcataaacgtccattgatgccggcgccctcctccatgcccagcaacgattccgtgcaaacgctctacagtgaccaccaCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgtg                                                                                                                                                    >  4:110262‑M1/100‑148 (MQ=255)     gcTACCGTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgtggtg                                                                                                                                                 <  8:154125/149‑1 (MQ=255)     gcTACCGTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgtggtg                                                                                                                                                 <  8:74897/149‑1 (MQ=255)     cctacaatgagactaattatcattaacgtccattgatgccggcgccctcctccatgcccagcaacgattccgtgcaaacgctctacagtgaccaccaCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgtggtg                                                                                                                                                 >  4:67854‑M1/98‑149 (MQ=255)       tACCGTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTggtggt                                                                                                                                               >  6:63058/1‑149 (MQ=255)       aacaatgagactaattatcattaacgtccattgatgccggcgccctcctccatgcccagcaacgattccgtgcaaacgctctacagtgaccaccaCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTggtggt                                                                                                                                               >  5:152673‑M1/96‑149 (MQ=255)           gTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACt                                                                                                                                           <  8:250576/149‑1 (MQ=255)            tGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTg                                                                                                                                          >  8:243949/1‑149 (MQ=255)               gcAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTg                                                                                                                                          >  7:260385/1‑146 (MQ=255)                cAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTaga                                                                                                                                      <  2:34966/149‑1 (MQ=255)                 aGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgt                                                                                                                                                     <  8:4753/133‑1 (MQ=255)                 aGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCgt                                                                                                                                                     >  7:4753/1‑133 (MQ=255)                       gCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTg                                                                                                                               <  5:63058/149‑1 (MQ=255)                          cttggCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCAc                                                                                                                            <  6:131278/146‑1 (MQ=255)                             ggCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACg                                                                                                                           <  5:2786/147‑1 (MQ=255)                             ggCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACg                                                                                                                           <  7:243949/147‑1 (MQ=255)                                      aGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCt                                                                                                                >  4:85057/1‑149 (MQ=255)                                           cAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGGCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTg                                                                                                               <  1:136253/145‑1 (MQ=255)                                           cAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTggg                                                                                                             <  8:172992/147‑1 (MQ=255)                                            aaTTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCAt                                                                                                          >  6:90040/1‑149 (MQ=255)                                            aaTTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCAt                                                                                                          >  1:46809/1‑149 (MQ=255)                                              ttGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATgg                                                                                                        <  5:254805/149‑1 (MQ=255)                                                gTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTTGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATgga                                                                                                       <  1:171094/148‑1 (MQ=255)                                                  tCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATggag                                                                                                      >  8:210970/1‑147 (MQ=255)                                                    acgacgCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGaggagg                                                                                                  <  2:231147/149‑1 (MQ=255)                                                      gacgCTGTAGCAAGCAGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGgc                                                                                                <  2:85140/149‑1 (MQ=255)                                                          cTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCg                                                                                            >  5:104365/1‑149 (MQ=255)                                                                  aGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTATAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAAt                                                                                    <  5:283628/149‑1 (MQ=255)                                                                  aGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAAt                                                                                    <  2:79992/149‑1 (MQ=255)                                                                   gCGGACGAATGAAGCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGTTGGTCTCTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATg                                                                                   <  5:291497/149‑1 (MQ=255)                                                                      gACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGAc                                                                                >  6:136136/1‑149 (MQ=255)                                                                      gACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGAc                                                                                <  2:46809/149‑1 (MQ=255)                                                                        gaacagTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGt                                                                              <  2:96299/144‑1 (MQ=255)                                                                         gAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGa                                                                                 <  4:136790/145‑1 (MQ=255)                                                                         gAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGa                                                                                 >  3:136790/1‑145 (MQ=255)                                                                         gAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGt                                                                              >  8:150244/1‑148 (MQ=255)                                                                            ggTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAAt                                                                          <  6:176279/149‑1 (MQ=255)                                                                                tCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGAt                                                                       <  4:228783/148‑1 (MQ=255)                                                                                     ggCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAg                                                                 >  8:230494/1‑149 (MQ=255)                                                                                     ggCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAg                                                                 <  3:278199/149‑1 (MQ=255)                                                                                              aGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCAttgt                                                        >  1:135874/1‑149 (MQ=255)                                                                                               accaccacggctggttgcatacctggctgcgtagcaagctcggcaacgcagccgTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCAttgtt                                                       >  5:152673‑M2/55‑149 (MQ=255)                                                                                                ccGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCAt                                                           >  7:88164/1‑144 (MQ=255)                                                                                                ccGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCAt                                                           <  8:88164/144‑1 (MQ=255)                                                                                                 caccacggctggttgcatacctggctgcgtagcaagctcggcaacgcagccgTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTAgg                                                     >  4:67854‑M2/53‑149 (MQ=255)                                                                                                 agCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATTGAGGAGGGCGGCGGCATCAATGGACGTTAATGATAATTAGTCTCTTTGTTgg                                                     <  8:260385/148‑1 (MQ=255)                                                                                                   cATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCg                                                   <  6:314414/149‑1 (MQ=255)                                                                                                    cacggctggttgcatacctggctgcgtagcaagctcggcaacgcagccgTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTTATGATAATTAGTCTCATTGTTGGCg                                                   >  4:110262‑M2/50‑148 (MQ=255)                                                                                                     tCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCg                                                   >  1:51538/1‑147 (MQ=255)                                                                                                     tCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGa                                                 <  2:51538/149‑1 (MQ=255)                                                                                                     acggctggttgcatacctggctgcgtagcaagctcggcaacgcagccgTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGa                                                 <  6:152673‑M2/101‑1 (MQ=255)                                                                                                       GGCTGCGTTGCAGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACAGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGCGAGCCGGCATCAATGGACGTTAATGATAATTTGTCTAATTGTTTGCGGAg                                                <  6:235232‑M1/148‑1 (MQ=255)                                                                                                          TGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAg                                            >  7:230494‑M1/1‑149 (MQ=255)                                                                                                            cGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGa                                           <  7:210970/148‑1 (MQ=255)                                                                                                                 ccGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCg                                                   >  6:286542/1‑135 (MQ=255)                                                                                                                 ccGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCg                                                   <  5:286542/135‑1 (MQ=255)                                                                                                                 ccGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAAt                                      <  5:312936/148‑1 (MQ=255)                                                                                                                   gAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAAttt                                    >  6:135546/1‑148 (MQ=255)                                                                                                                       ttGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGCGCATGGAGGAGGGCGCCGGCATCAATGGAc                                                                                <  2:60765/100‑1 (MQ=255)                                                                                                                       ttGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGCGCATGGAGGAGGGCGCCGGCATCAATGGAc                                                                                >  1:60765/1‑100 (MQ=255)                                                                                                                        tGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACACTAGAGCCTTCGCACCGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTACTGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAAcc                              <  4:249411/149‑1 (MQ=255)                                                                                                                          cTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAAccc                             <  7:150244/148‑1 (MQ=255)                                                                                                                             cGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCAt                           <  5:90040/147‑1 (MQ=255)                                                                                                                             cGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATc                          <  3:85057/148‑1 (MQ=255)                                                                                                                               cAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGt                       >  5:131339/1‑149 (MQ=255)                                                                                                                                aGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGt                       >  7:148065/1‑148 (MQ=255)                                                                                                                                  ccAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTaa                    >  2:241446/1‑149 (MQ=255)                                                                                                                                   cAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAAc                   <  3:95519/149‑1 (MQ=255)                                                                                                                                      gTATCCAACCAGCCGTGGTGCTCACTGTAGAGCGATTGCACGGAATCGTTGCTCGGCATGGAGGAGGGCGCCGGCATCAATGGACGATAATGATAATTAGTCTCATTGTTGCCGGAGCAAGAATAATTTGCAACCCATCAGTTAAcgcg                >  7:111110/1‑149 (MQ=255)                                                                                                                                       tATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAACGCGt               <  5:136136/149‑1 (MQ=255)                                                                                                                                            aaCCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCAt                           >  6:150670/1‑132 (MQ=255)                                                                                                                                            aaCCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCAt                           <  5:150670/132‑1 (MQ=255)                                                                                                                                              ccAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCaa                                <  5:85776/125‑1 (MQ=255)                                                                                                                                              ccAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCaa                                >  6:85776/1‑125 (MQ=255)                                                                                                                                                    gTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGGTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAACGCGTAAAGCGGGTAATg  <  6:104365‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ACGCGCTACCGTGCGCAGGAAGGCCCTGGGCGCATTCAGCTGCAATTGTTCACGACGCTGTAGCAAGCGGACGAAGGTATCCTGGGCGAGGTCAGCCGCATCGGCTGCGTTGCCGAGCTTGCTACGCAGCCAGGTATGCAACCAGCCGTGGTGGTCACTGTAGAGCGTTTGCACGGAATCGTTGCTGGGCATGGAGGAGGGCGCCGGCATCAATGGACGTTAATGATAATTAGTCTCATTGTTGGCGGAGCAAGATTAATTTGCAACCCATCAGTTAACGCGTAAAGCCGGTAATG  >  NC_002947/185929‑186224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.