| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 379962 | 46 (0.880) | 4 (0.080) | 4/256 | NT | 8.1% | coding (259/1107 nt) | gbcB | glycine‑betaine dioxygenase subunit |
| ? | NC_002947 | = 380031 | 47 (0.940) | coding (328/1107 nt) | gbcB | glycine‑betaine dioxygenase subunit | |||||
CCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/379813‑379962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCT < NC_002947/380031‑379885 CCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACC < 6:181254/149‑1CCTTCTGCTTCATGGCCGACCAGCCGAGCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACC < 6:185706/149‑1 CTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCATCG > 6:279503/1‑149 TCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGGCAGCTCGGCGCCTTCGTGCATGGTGTCATG > 5:318063/1‑148 TCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAG > 3:141936/1‑149 GAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGA < 6:318063/148‑1 CGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCA < 4:141936/148‑1 CACCGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTGTAGGACCGCATCACGGGCTTGCCTTCGA < 2:238366/149‑1 ACCGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTG < 7:249114/120‑1 ACCGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTG > 8:249114/1‑120 CGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCT > 4:282262/1‑149 CGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTGTAGGACCGCATCACGGGCTTGCCTT < 5:248003/143‑1 CGGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTGTAGGACCGCATCACGGGCTTGCCTT > 6:248003/1‑143 CCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/379813‑379962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgGCAGCTCGGCGCCTTCGTGCATGGTGTCATGCAGGAAGTTCGACACCAGGCCACCCGGCACGCGCTTGACGGTGATCGAGAAGCTGTAGGGCACTGACGGCGAACTGGAGATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCT < NC_002947/380031‑379885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |