New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 379962	46 (0.880)	4 (0.080)	4/256	NT	8.1%	coding (259/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit
	?	NC_002947	= 380031	47 (0.940)					coding (328/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit

CTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCG  >  NC_002947/379814‑380109                                                                                                                                                     |                                                                                                                                                    cTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCATCG                                                                                                                                                     >  6:279503‑M1/1‑149 (MQ=255)  ttCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGt                                                                                                                                                    >  6:317282/1‑149 (MQ=255)    cTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGt                                                                                                                                                    <  6:60365/147‑1 (MQ=255)          cATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGcgcg                                                                                                                                            >  2:253896/1‑149 (MQ=255)             ggCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGc                                                                                                                                         >  4:135036/1‑149 (MQ=255)                cGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTTCCCTGGAGCTTGAGATCGAAGGCAAGCCCGTTATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGttcagg                                                                                                                                      <  4:73395/149‑6 (MQ=255)                 gACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCggg                                                                                                                                     <  3:80312/149‑1 (MQ=255)                    cAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGAAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATGACCGTAAAGCGCGTGCCGGGTgg                                                                                                                                  >  8:102210/1‑149 (MQ=255)                      gCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGcc                                                                                                                                <  7:206380/149‑1 (MQ=255)                             aTGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGgtgt                                                                                                                          <  2:202733/148‑1 (MQ=255)                             aTGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGgtgt                                                                                                                          <  1:167736/148‑1 (MQ=255)                                 tcttcttcAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGgcagctcggcgccttcgtgcatggtgtcatg                                                                                                                      >  5:318063‑M1/1‑117 (MQ=255)                                     cttcAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCATCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTc                                                                                                                  <  5:279503/148‑1 (MQ=255)                                      ttcAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCt                                                                                                                >  8:270125/1‑149 (MQ=255)                                       tcAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGgcagctcggcgccttcgtgcatggtgtcatgcaggaag                                                                                                               >  3:141936‑M1/1‑111 (MQ=255)                                         aaGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCa                                                                                                             <  1:253896/149‑1 (MQ=255)                                         aaGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCa                                                                                                             >  7:67649/1‑149 (MQ=255)                                              aGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGt                                                                                                                                           <  7:173184/114‑1 (MQ=255)                                              aGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGt                                                                                                                                           >  8:173184/1‑114 (MQ=255)                                              aGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGaca                                                                                                        >  7:126599/1‑149 (MQ=255)                                                  cAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCAt                                                                                                    <  7:270125/149‑1 (MQ=255)                                                   aGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATg                                                                                                   <  6:65918/149‑1 (MQ=255)                                                       cGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCAc                                                                                                <  7:144872/148‑1 (MQ=255)                                                        gTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACg                                                                                               >  6:109626/1‑148 (MQ=255)                                                        gTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACg                                                                                               >  3:155932/1‑148 (MQ=255)                                                         ttACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGaa                                                                                             <  6:123698/149‑1 (MQ=255)                                                                        agaTCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcg                                                                              >  4:282262‑M2/1‑147 (MQ=255)                                                                         gaTCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTg                                                                                                                              >  3:194113/1‑100 (MQ=255)                                                                         gaTCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTg                                                                                                                              <  4:194113/100‑1 (MQ=255)                                                                           tCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcggtg                                                                           <  2:238366‑M2/149‑6 (MQ=255)                                                                             gAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtga                                                                          <  6:318063‑M1/148‑76 (MQ=255)                                                                              aaGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcg                                                                              <  5:248003‑M2/143‑3 (MQ=255)                                                                              aaGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcg                                                                              >  6:248003‑M2/1‑141 (MQ=255)                                                                                        cGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTgg                                                              <  1:238366/149‑1 (MQ=255)                                                                                           gATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTg                                                                                                                                          >  7:194482/1‑70 (MQ=255)                                                                                           gATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTg                                                                                                                                          <  8:194482/70‑1 (MQ=255)                                                                                              gCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGTTTGGCTGGTGTCGAACTTCCTGCATGACACCAt                                                                                                    <  1:302325/105‑1 (MQ=255)                                                                                               cGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtgatcgagaagctgtagggca                                                        <  4:141936‑M1/148‑94 (MQ=255)                                                                                                    cTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAAc                                                   <  8:126599/148‑1 (MQ=255)                                                                                                       cacCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcggt                                                                            <  7:249114‑M2/120‑5 (MQ=255)                                                                                                       cacCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcggt                                                                            >  8:249114‑M2/1‑116 (MQ=255)                                                                                                          cATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATc                                             >  4:30840/1‑148 (MQ=255)                                                                                                           aTCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGa                                           >  6:249651/1‑149 (MQ=255)                                                                                                            tctcCAGTTCGCCGTCTGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGAc                                          >  8:170649/1‑149 (MQ=255)                                                                                                                 gttctgCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTccc                                     <  7:18582/144‑1 (MQ=255)                                                                                                                  gTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCct                                    >  2:315327/1‑149 (MQ=255)                                                                                                                     cGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCctgct                                 >  5:95084/1‑149 (MQ=255)                                                                                                                      gCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCctgctg                                <  3:135036/149‑1 (MQ=255)                                                                                                                       ccGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACCCCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTccc                                     >  8:18582/1‑143 (MQ=255)                                                                                                                        cGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTgg                               >  5:281398/1‑148 (MQ=255)                                                                                                                          tCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTAGCaa                            <  5:249651/149‑1 (MQ=255)                                                                                                                             gTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGt                         <  8:67649/149‑1 (MQ=255)                                                                                                                              tGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcggtgatcgagaagctgtagggcactgacggcgaactggagatggtgtaggaccg                         <  4:141936‑M2/148‑56 (MQ=255)                                                                                                                                  cTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTc                                                                                                                  >  8:190605/1‑55 (MQ=255)                                                                                                                                  cTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTg                     >  1:246792/1‑148 (MQ=255)                                                                                                                                         ttCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTc                                                      >  3:304041/1‑108 (MQ=255)                                                                                                                                         ttCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTc                                                      <  4:304041/108‑1 (MQ=255)                                                                                                                                         ttCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTc             >  3:247741/1‑149 (MQ=255)                                                                                                                                           ctcGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTc             <  1:315327/147‑1 (MQ=255)                                                                                                                                              gATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGggc         <  6:95084/148‑1 (MQ=255)                                                                                                                                                tCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCcggtgatcgagaagctgtagggcactgacggcgaactggagatggtgtaggaccgcatcacgggcttgccttc       <  6:318063‑M2/148‑74 (MQ=255)                                                                                                                                                 cACCGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtgatcgagaagctgtagggcactgacggcgaactggagatggtgtaggaccgcatcacgggcttgccttcga     <  2:238366‑M1/149‑145 (MQ=255)                                                                                                                                                  aCCGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtgatcgagaagctgtagggcactgacggcgaactggagatggtg                                 <  7:249114‑M1/120‑117 (MQ=255)                                                                                                                                                  aCCGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtgatcgagaagctgtagggcactgacggcgaactggagatggtg                                 >  8:249114‑M1/1‑4 (MQ=255)                                                                                                                                                    cGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtgatcgagaagctgtagggcactgacggcgaactggagatggtgtaggaccgcatcacgggcttgccttcgatct  >  4:282262‑M1/1‑2 (MQ=255)                                                                                                                                                    cGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtgatcgagaagctgtagggcactgacggcgaactggagatggtgtaggaccgcatcacgggcttgcctt        <  5:248003‑M1/143‑142 (MQ=255)                                                                                                                                                    cGgcagctcggcgccttcgtgcatggtgtcatgcaggaagttcgacaccaggccacccggcacgcgcttgacggtgatcgagaagctgtagggcactgacggcgaactggagatggtgtaggaccgcatcacgggcttgcctt        >  6:248003‑M1/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCATCTCCAGTTCGCCGTCAGTGCCCTACAGCTTCTCGATCACCGTCAAGCGCGTGCCGGGTGGCCTGGTGTCGAACTTCCTGCATGACACCATGCACGAAGGCGCCGAGCTGCCGGTGCACGGCCCGGTGGGGCTGTTCAACGCCATCGACTTCCCTGCTGGCAAGGTGCTGTACCTGTCGGGCGGCGTCG  >  NC_002947/379814‑380109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.