| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 437616 | 33 (0.630) | 3 (0.060) | 3/256 | NT | 7.8% | coding (744/1008 nt) | rdoA | serine/threonine protein kinase |
| ? | NC_002947 | = 437674 | 39 (0.780) | coding (686/1008 nt) | rdoA | serine/threonine protein kinase | |||||
CCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/437465‑437616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcgACGATTGCCGCATGGGCCCAGCGGTGCAAGACCTGTGGATGATGCTGGCCGGCAACCGCGAGGAGCGCCTGGGGCAACTGGCCGAGCTGATCGACGGCTACAACGAGTTCCACGACTTCGACCCGCGCGAACTGGCCCTGATCGAG < NC_002947/437674‑437529 CCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTC > 3:95445/1‑148 GGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCG < 7:70864/149‑1 TCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGACGATTGCCGCATGGGCCCAGCGGTGCAAGACCTGTGGATGATGCTGGCCGGCAACCGCGAGGAGC < 2:11798/149‑1 CGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGACGATTGCCGCATGGGCCCAGCGGTGCAAGACCTGTGGATGATGCTGGCCGGCAACCGCGA < 1:239858/130‑1 CGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCGACGATTGCCGCATGGGCCCAGCGGTGAAAGACCTGTGGATGATGCTGGCCGGCAACCGCGA > 2:239858/1‑130 GACGATTGCCGCATGGGCCCAGCGGTGCAAGACCTGTGGATGATGCTGGCCGGCAACCGCGAGGAGCGCCTGGGGCAACTGGCCGAGCTGATCGACGGCTACAACGAGTTCCACGACTTCGACCCGCGCGAACTGGCCCTGATCGAG < 8:237527/147‑1 CCGGGTCGTCCCAGCGCCTTGCCAGCCAGGCGCTATAGTGCAGCTGGCGCAGGGCGCGCAGGGGCTCGATCAGGGCCAGTTCGCGCGGGTCGAAGTCGTGGAACTCGTTGTAGCCGTCGATCAGCTCGGCCAGTTGCCCCAGGCGCTCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/437465‑437616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcgACGATTGCCGCATGGGCCCAGCGGTGCAAGACCTGTGGATGATGCTGGCCGGCAACCGCGAGGAGCGCCTGGGGCAACTGGCCGAGCTGATCGACGGCTACAACGAGTTCCACGACTTCGACCCGCGCGAACTGGCCCTGATCGAG < NC_002947/437674‑437529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |