| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 448279 | 59 (1.130) | 4 (0.080) | 3/248 | NT | 6.4% | coding (858/1284 nt) | PP_0369 | diguanylate cyclase |
| ? | NC_002947 | = 448337 | 62 (1.280) | coding (916/1284 nt) | PP_0369 | diguanylate cyclase | |||||
GGGCGCCGTGCGCTGAACGAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/448175‑448279‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggccacCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGGGTGTCATTGAATTTCTTGAAGTGGTCGACATCGGTCATGGCGATCACATAGTTACGCCCCAGGCGCTGCATGCGCTC < NC_002947/448337‑448193 GGGCGCCGTGCGCTGAACGAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACC > 4:164110/1‑149 GAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCCCTTCAAGAAATTCAATGACACCCACGGCCACCGCCGGTGACCTTTGACAAGCGGCTGGCGACCAACCGCAGCACCTGGGCACCGACATCGTGG < 6:210696/149‑1 GAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGG < 3:164110/149‑1 ATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGG < 7:31211/149‑1 CACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGGGTGTCATTGAATTTCTTGAAGTGGTCGACATCGGTCATGGCGATCACATAGTTACGCCCCAGGCGCTGCATG > 3:119341/1‑149 ACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGGGTGTCATTGAATTTCTTGAAGTGGTCGACATCGGTCATGGCGATCACATAGTTACGCCCCAGGCGCcgtgcgc > 5:11361/1‑142 CCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGGGTGTCATTGAATTTCTTGAAGTGGTCGACATCGGTCATGGCGATCACATAGTTACGCCCCAGGCGCTGCATGCGCTC > 1:59880/1‑149 GGGCGCCGTGCGCTGAACGAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/448175‑448279‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggccacCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGGGTGTCATTGAATTTCTTGAAGTGGTCGACATCGGTCATGGCGATCACATAGTTACGCCCCAGGCGCTGCATGCGCTC < NC_002947/448337‑448193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |