New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 44827959 (1.130)4 (0.080) 3/248 NT 6.4% coding (858/1284 nt) PP_0369 diguanylate cyclase
?NC_002947 = 448337 62 (1.280)coding (916/1284 nt) PP_0369 diguanylate cyclase

GAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCG  >  NC_002947/448193‑448483
                                                                                                                                                |                                                                                                                                                  
gAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGgtgg                                                                                                                                                >  1:59880‑M2/1‑145 (MQ=255)
    gcgcacggcgcctggggcGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGgtggccgt                                                                                                                                            >  5:11361‑M2/8‑141 (MQ=255)
     cATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGgtggccgtg                                                                                                                                           >  3:119341‑M2/1‑140 (MQ=255)
        gCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGcc                                                                                                                                         >  3:27313/1‑148 (MQ=255)
          aGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTAc                                                                                                                                      >  4:80257/1‑149 (MQ=255)
              ccTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGc                                                                                                                                          <  2:9442/141‑1 (MQ=255)
              ccTGGGGCGTAACTATGTGATCGCCACGACAGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGccagatcgg                                                                                                                                  >  1:9442/1‑142 (MQ=255)
               cTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTa                                                                                                                                 >  3:240671/1‑149 (MQ=255)
               cTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGAGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTa                                                                                                                                 >  7:69960/1‑149 (MQ=255)
                  gggCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATgg                                                                                                                              <  3:80257/149‑1 (MQ=255)
                      gTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCggg                                                                                                                          <  5:132287/149‑1 (MQ=255)
                       tAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCggg                                                                                                                          >  5:77988/1‑148 (MQ=255)
                         aCTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGgga                                                                                                                        <  6:155715/148‑1 (MQ=255)
                           tATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGTTGGCCGTGCCTACCGTTATGGCGGggag                                                                                                                       >  5:101630/1‑147 (MQ=255)
                             tgtgATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGggagga                                                                                                                     <  1:320768/147‑1 (MQ=255)
                               tgATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTc                                                                                                                 >  2:151600/1‑149 (MQ=255)
                                 aTCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCggg                                                                                                                          >  7:290555/1‑138 (MQ=255)
                                 aTCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCggg                                                                                                                          <  8:290555/138‑1 (MQ=255)
                                  tCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGcc                                                                                                              <  8:205477/149‑1 (MQ=255)
                                        tGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGgtg                                                                                                        <  1:151600/149‑1 (MQ=255)
                                            cGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCg                                                                                                    >  2:325084/1‑149 (MQ=255)
                                              aTGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGcc                                                                                                  >  8:297389/1‑149 (MQ=255)
                                              aTGTCGACCACTTCAAGAAATTCAATGACACCCACCGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCAAAGGTCACCGGCGGTGGCCGTGCCTAACGTTATGGCGGGGATGAGTTAGCCCTGGTGTTCGca                                                                                                  >  4:103511/1‑148 (MQ=255)
                                                   gACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGc                                                                                               >  3:294249/1‑147 (MQ=255)
                                                   gACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGc                                                                                               >  6:68925/1‑147 (MQ=255)
                                                         ttaaaGAAATTCAATGACACCCACGGCCACGATTTAGGTGACCAGGTGCTGCGGTTGGTCGACAGCCTCTTGTCCAAGGTCAACGGCGGTGGCCGTGCCTACCGTTATGGAGGGGAGGAGTTCTCCCTTGTGTTCGCCTCCAAGAacgc                                                                                       >  8:264455/4‑149 (MQ=255)
                                                         ttCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTAc                                                                                                                                      <  8:100414/102‑1 (MQ=255)
                                                         ttCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTAc                                                                                                                                      >  7:100414/1‑102 (MQ=255)
                                                           cAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGAccgccg                                                                                     >  6:291124/1‑149 (MQ=255)
                                                             aGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCcgcg                                                                                   >  1:288999/1‑149 (MQ=255)
                                                              gAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCcgcg                                                                                   >  7:1678/1‑148 (MQ=255)
                                                                  ttCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATg                                                                              >  4:79712/1‑149 (MQ=255)
                                                                       tGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGc                                                                         >  8:229058/1‑149 (MQ=255)
                                                                          cacCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTAc                                                                                                                                      >  2:164795/1‑85 (MQ=255)
                                                                          cacCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTAc                                                                                                                                      >  2:159731/1‑85 (MQ=255)
                                                                          cacCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTAc                                                                                                                                      <  1:164795/85‑1 (MQ=255)
                                                                          cacCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTAc                                                                                                                                      <  1:159731/85‑1 (MQ=255)
                                                                           acCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCa                                                                     >  1:226445/1‑149 (MQ=255)
                                                                           acCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGACGGCAAGACCGCCGCGGAATGCGTGCCGCa                                                                     >  6:310707/1‑149 (MQ=255)
                                                                             ccACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGgtggccgtgggtgtcattgaatttcttgaagtggtcgacatcggtcatggcgatcacatagttacgccccaggcgctgcat                                                                   <  7:31211‑M2/149‑82 (MQ=255)
                                                                             ccACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGcc                                                                                                              <  2:318078/106‑1 (MQ=255)
                                                                             ccACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGcc                                                                                                              >  1:318078/1‑106 (MQ=255)
                                                                             ccACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCAtg                                                                   >  8:40624/1‑149 (MQ=255)
                                                                             ccACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCAtg                                                                   >  1:242874/1‑149 (MQ=255)
                                                                             ccACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCAtg                                                                   >  4:11550/1‑149 (MQ=255)
                                                                              cACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCAtgt                                                                  <  1:118954/149‑1 (MQ=255)
                                                                              cACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCAtgt                                                                  <  4:27313/149‑1 (MQ=255)
                                                                                  gCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGaa                                                              <  3:103511/149‑1 (MQ=255)
                                                                                   ccACGATGTCGGTGCCCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCAAAGGTCACCGGCGgtggccgtgggtgtcattgaatttcttgaaggggtcgacatcggtcatggcgatcacatagttacgccccaggcgctgcatgcgctc                                                             <  6:210696‑M2/149‑88 (MQ=255)
                                                                                   ccACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGgtggccgtgggtgtcattgaatttcttgaagtggtcgacatcggtcatggcgatcacatagttacgccccaggcgctgcatgcgctc                                                             <  3:164110‑M2/149‑88 (MQ=255)
                                                                                   ccACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAg                                                             >  1:57517/1‑149 (MQ=255)
                                                                                      cGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCcg                                                          >  7:249612/1‑149 (MQ=255)
                                                                                         tGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCcgtgc                                                       <  2:57517/149‑1 (MQ=255)
                                                                                          gTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCcgtgcg                                                      >  3:60603/1‑149 (MQ=255)
                                                                                          gTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCcgtgcg                                                      >  3:169110/1‑149 (MQ=255)
                                                                                           tCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCcgtgcgt                                                     <  5:87122/149‑1 (MQ=255)
                                                                                             ggTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCcgtgcgtg                                                    >  8:218633/1‑148 (MQ=255)
                                                                                             ggTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCcgtgcgtg                                                    <  5:68925/148‑1 (MQ=255)
                                                                                               tGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAg                                                 <  5:291124/149‑1 (MQ=255)
                                                                                                   cAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGAt                                             >  2:294559/1‑149 (MQ=255)
                                                                                                    aGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATc                                            <  5:310707/149‑1 (MQ=255)
                                                                                                     ggTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGgtggccgtgggtgtcattgaatttcttgaagtggtcgacatcggtcatggcgatcacatagttacgccccaggcgctgcatgcgctcgttcagcgcacggcgccc                                           >  4:164110‑M2/1‑44 (MQ=255)
                                                                                                      gcgctgcGGCTGGTCCCCAGCCGCTTGGCCAACGGCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGTTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAGGCCGTGCGTGAAGTGATCGc                                          <  4:240671/147‑1 (MQ=255)
                                                                                                      gTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACGGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATc                                            <  1:325084/147‑1 (MQ=255)
                                                                                                      gTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGc                                          <  3:11550/149‑1 (MQ=255)
                                                                                                            cGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAAtt                                     <  3:79712/148‑1 (MQ=255)
                                                                                                            cGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAAtt                                     <  7:297389/148‑1 (MQ=255)
                                                                                                            cGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTa                                    <  8:1678/149‑1 (MQ=255)
                                                                                                             ggTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTAc                                   <  2:288999/149‑1 (MQ=255)
                                                                                                                  gTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGAt                              >  3:256620/1‑149 (MQ=255)
                                                                                                                   tCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATg                             >  6:69954/1‑149 (MQ=255)
                                                                                                                   tCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATg                             >  2:75609/1‑149 (MQ=255)
                                                                                                                     gCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGc                            <  7:229058/148‑1 (MQ=255)
                                                                                                                     gCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCa                           <  2:226445/149‑1 (MQ=255)
                                                                                                                        aGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCTGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCt                        <  6:77988/149‑1 (MQ=255)
                                                                                                                        aGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGAAAGACCGCCGCGGAATGCGTTCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCt                        <  7:264455/149‑1 (MQ=255)
                                                                                                                                   cAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGc             <  8:249612/149‑1 (MQ=255)
                                                                                                                                        tCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAAc        <  1:294559/149‑1 (MQ=255)
                                                                                                                                          aCCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAAccg      >  5:141956/1‑149 (MQ=255)
                                                                                                                                              gcggTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAAccgcccg  <  1:75609/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
GAGCGCATGCAGCGCCTGGGGCGTAACTATGTGATCGCCATGACCGATGTCGACCACTTCAAGAAATTCAATGACACCCACGGCCACGATGTCGGTGACCAGGTGCTGCGGTTGGTCGCCAGCCGCTTGTCCAAGGTCACCGGCGGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCG  >  NC_002947/448193‑448483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.