| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2460351 = | 47 (0.900) | 5 (0.100) | 4/250 | NT | 10.7% | coding (453/480 nt) | PP_2153 | hypothetical protein |
| ? | NC_002947 | 2460402 = | 39 (0.800) | coding (402/480 nt) | PP_2153 | hypothetical protein | |||||
ACGGCCTGCTGCTGCGCGGCAAGGTCACCCATTGCGACCCTCGCCCGGAGGGCGGCTTCGAGGTCGGTACCGAGTTCATCGACATGACCGACGCCCAACGACAACTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2460505‑2460351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcagTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTCCGGGCGAGGGTCGCAATGGGTGACCTTGCCGCGCAGCAGCAGGCCGTGGGCGCGCGGCATCAGCACCATTTTCACTTTCACCCG > NC_002947/2460402‑2460542 ACGGCCTGCTGCTGCGCGGCAAGGTCACCCATTGCGACCCTCGTCCGGAGGGCGGCTTCGAGGTCGGTACCGAGTTCATCGACATGACCGACGCCCAACGACAACTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGC > 1:227196/1‑149ACGGCCTGCTGCTGCGCGGCAAGGTCACCCATTGCGACCCTCGCCCGGAGGGCGGCTTCGAGGTCGGTACCGAGTTCATCGACATGACCGACGCCCAACGACAACTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGC > 5:77084/1‑149 CAACTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGCCAGCAGTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTTCGGGCGAGGGTCGCAATGGGTGACCTTGCCGCGCAG > 5:57445/1‑147 CTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGCCAGCAGTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTCCGGGCGAGGGTCGCAATGGGTGACCTTGCCGCGCAGCAG > 3:143360/1‑147 CTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGCCAGCAGTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTCCGGGCGAGGGTC < 5:79537/120‑1 CTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGCCAGCAGTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTCCGGGCGAGGGTC > 6:79537/1‑120 CCGATACATCCTGCAGCGCCAGCAACAACAACGGCGCCAGCAGTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTCCGGGCGAGGGTCGCAATGGGTGACCTTGCCGCGCAGCAGCAGGCCGTGG < 4:143360/149‑1 GCCAGCAGTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTCCGGGCGAGGGTCGCAATGGGTGACCTTGCCGCGCAGCAGCAGGCCGTGGGCGCGCGGCATCAGCACCATTTTCACTTTCACCCG < 7:95908/149‑1 ACGGCCTGCTGCTGCGCGGCAAGGTCACCCATTGCGACCCTCGCCCGGAGGGCGGCTTCGAGGTCGGTACCGAGTTCATCGACATGACCGACGCCCAACGACAACTGCTGGCCCGATACATCCTGCAGCGCCAGCAACAACAACGGCGCCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2460505‑2460351‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcagTTGTCGTTGGGCGTCGGTCATGTCGATGAACTCGGTACCGACCTCGAAGCCGCCCTCCGGGCGAGGGTCGCAATGGGTGACCTTGCCGCGCAGCAGCAGGCCGTGGGCGCGCGGCATCAGCACCATTTTCACTTTCACCCG > NC_002947/2460402‑2460542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |