| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2593807 = | 58 (1.110) | 4 (0.080) | 4/254 | NT | 7.2% | coding (305/411 nt) | PP_5509 | hypothetical protein |
| ? | NC_002947 | 2593864 = | 47 (0.950) | coding (362/411 nt) | PP_5509 | hypothetical protein | |||||
GACAGTTCTTTCAGGCGCGGAGGCCGTTGGGCTGGAGTCGTCATGGCTTACCTACGGGAGCGGAAGCTGGAGAAGCTGCTGGTGCGATAGCTGTAGCTGGCTCGCGGTGCAACGTAGGCTGGGCGTGGAGCCACATAGGCCGGACGCGGAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2593960‑2593807‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagccaGCTACAGCTATCGCACCAGCAGCTTCTCCAGCTTCCGCTCCCGTAGGTAAGCCATGACGACTCCAGCCCAACGGCCTCCGCGCCTGAAAGAACTGTCCTTGCGCATTGAGCGTGTGGACAACGGAGTCATCGTCCG > NC_002947/2593864‑2593999 GACAGTTCTTTCAGGCGCGGAGGCCGTTGGGCTGGAGTCGTCATGGCTTACCTACGGGAGCGGAAGCTGGAGAAGCTGCTGGTGCGATAGCTGTAGCTGGCTCGCGGTGCAACGTAGGCTGGGCGTGGAGCCACATAGGCCGGACGCGG < 6:38642/149‑1 ACAGTTCTTTCAGGCGCGGAGGCCGTTGGGCTGGAGTCGTCATGGCTTACCTACGGGAGCGGAAGCTGGAGAAGCTGCTGGTGCGATAGCTGTAGCTGGCTCGCGGTGCAACGTAGGCTGGGCGTGGAGCCACATAGGCCGGACGCGGA < 1:187841/149‑1 CTGGCTCGCGGTGCAACGTAGGCTGGGCGTGGAGCCACATAGGCCGGACGCGGAGCCAGCTACAGCTATCGCACCAGCAGCTTCTCCAGCTTCCGCTCCCGTAGGTAAGCCATGACGACTCCAGCCCAACGGCCTCCGCGCCT < 7:105886/143‑1 CTGGCTCGCGGTGCAACGTAGGCTGGGCGTGGAGCCACATAGGCCGGACGCGGAGCCAGCTACAGCTATCGCACCAGCAGCTTCTCCAGCTTCCGCTCCCGTAGGTAAGCCATGACGACTCCAGCCCAACGGCCTCCGCGCCT > 8:105886/1‑143 TGGCTCGCGGTGCAACGTAGGCTGGGCGTGGAGCCACATAGGCCGGACGCGGAGCCAGCTACAGCTATCGCGCCAGCAGCTTCTCCAGCTTCCGCTCCCGTAGGTAAGCCATGACGACTCCAGCCCAACGGCCTCCGCGCCTGAAAGAA > 3:231733/1‑149 GGACGCGGAGCCAGCTACAGCTATCGCTCCAGCAGCTTCTCCAGCTTCCGCTCCCGTAGGTAAGCCATGACGACTCCAGCCCAACGGCCTCCGCGCCTGAAAGAACTGTCCTTGCGCATTGAGCGTGTGGACAACGGAGTCATCGTCCG < 4:231733/149‑1 GACAGTTCTTTCAGGCGCGGAGGCCGTTGGGCTGGAGTCGTCATGGCTTACCTACGGGAGCGGAAGCTGGAGAAGCTGCTGGTGCGATAGCTGTAGCTGGCTCGCGGTGCAACGTAGGCTGGGCGTGGAGCCACATAGGCCGGACGCGGAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2593960‑2593807‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagccaGCTACAGCTATCGCACCAGCAGCTTCTCCAGCTTCCGCTCCCGTAGGTAAGCCATGACGACTCCAGCCCAACGGCCTCCGCGCCTGAAAGAACTGTCCTTGCGCATTGAGCGTGTGGACAACGGAGTCATCGTCCG > NC_002947/2593864‑2593999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |