| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2844866 = | 50 (0.960) | 3 (0.060) | 3/250 | NT | 6.4% | coding (883/1029 nt) | PP_2496 | hypothetical protein |
| ? | NC_002947 | 2844913 = | 41 (0.840) | coding (836/1029 nt) | PP_2496 | hypothetical protein | |||||
AGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTACGAAGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCACGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2845021‑2844866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggcctTCGTACAGCTCCTGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTGGC > NC_002947/2844913‑2845054 AGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCTCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTACGAAGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGC < 2:198050/149‑1AGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTTCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCATGAGCTGTACGAAGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGC < 3:200114/149‑1 GCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTACGAAGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCAC > 2:185618/1‑149 TGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTACGAAGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCACGGCC > 5:187496/1‑149 GGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTACGAAGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCACGGCCT < 6:187496/148‑1 AGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCACGGCCTTCGTACAGCTCCTGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCC > 4:147829/1‑148 GCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCACGGCCTTCGTACAGCTCCTGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAG > 2:282187/1‑149 CCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCACGGCCTTCGTACAGCTCCTGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGC > 2:163920/1‑149 ACGGCCTTCGTACAGCTCCTGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTGGC > 2:137461/1‑149 AGGCGCTGGGCTTCTTCATGAACGTGATGTGCGAAACCAGCCCGACCGGCGCCCTGCCGGAACAGCTACCCAACGAGCGCGCGCTGCGCAAAGTGCAGGAGCTGTACGAAGGCCGTGGTCGTGGCAGCCAGCTGGACTCCGCACGCGGCACGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2845021‑2844866‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggcctTCGTACAGCTCCTGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCGGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCCCAGCGCCTCATGCCACTGCACCTTGCGTTCAGCCAGGTGGC > NC_002947/2844913‑2845054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |