New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2844866 =	50 (0.960)	3 (0.060)	3/250	NT	6.4%	coding (883/1029 nt)	PP_2496	hypothetical protein
	?	NC_002947	2844913 =	41 (0.840)					coding (836/1029 nt)	PP_2496	hypothetical protein

AGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCC  >  NC_002947/2844722‑2845013                                                                                                                                                 |                                                                                                                                                       aGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGcc                                                                                                                                                    >  5:194035/1‑149 (MQ=255) aGGCGACCAACTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGcc                                                                                                                                                    >  2:1877/1‑149 (MQ=255)   gccacctggctgaacgcaaggtgcagtggcatgaggcgctgggcttcttcatgaacgtgatgtgcgaaaccagcccgaccggcgccctgccggaacagctacccaacgagcgcgcgctgcgcaaagtgcaggagctgtacgaAGGCCGt                                                                                                                                                  >  2:137461‑M1/143‑149 (MQ=255)   gCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGt                                                                                                                                                  >  7:260331/1‑149 (MQ=255)        cAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCcgc                                                                                                                                             >  3:295791/1‑149 (MQ=255)             gCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCg                                                                                                                                        >  4:179402/1‑149 (MQ=255)              cAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGc                                                                                                                                         <  1:1877/147‑1 (MQ=255)                          cAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAgctggc                                                                                                                           >  1:163973/1‑149 (MQ=255)                          cAAGGCGCGTTGCTGGACTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATGCGGGGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAgct                                                                                                                              <  4:80829/146‑1 (MQ=255)                               cgcgTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCa                                                                                                                      <  3:179402/149‑1 (MQ=255)                                gcgTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAgctggctg                                                                                                                         <  4:30092/145‑1 (MQ=255)                                gcgTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAgctggctg                                                                                                                         >  3:30092/1‑145 (MQ=255)                                     gCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCa                                                                                                                >  6:243963/1‑149 (MQ=255)                                      cTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCAc                                                                                                               >  3:267087/1‑149 (MQ=255)                                        gctgggcttcttcatgaacgtgatgtgcgaaaccagcccgaccggcgccctgccggaacagctacccaacgagcgcgcgctgcgcaaagtgcaggagctgtacgaAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACgg                                                                                                             >  2:163920‑M1/106‑149 (MQ=255)                                         gATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACgg                                                                                                             <  8:260331/148‑1 (MQ=255)                                         ctgggcttcttcatgaacgtgatgtgcgaaaccagcccgaccggcgccctgccggaacagctacccaacgagcgcgcgctgcgcaaagtgcaggagctgtacgaAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGc                                                                                                            >  2:282187‑M1/105‑149 (MQ=255)                                            ggcttcttcatgaacgtgatgtgcgaaaccagcccgaccggcgccctgccggaacagctacccaacgagcgcgcgctgcgcaaagtgcaggagctgtacgaAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCt                                                                                                          >  4:147829‑M1/102‑148 (MQ=255)                                              gggCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATAGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTc                                                                                                        <  4:48345/148‑1 (MQ=255)                                                 cACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTa                                                                                                     >  5:205898/1‑148 (MQ=255)                                                 cACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTAc                                                                                                    <  1:46865/149‑1 (MQ=255)                                                    ccTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGc                                                                                                 >  5:60661/1‑149 (MQ=255)                                                        gCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑t                                                                                           <  3:166433/149‑1 (MQ=255)                                                          cGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑Tg                                                                                          >  2:92049/1‑148 (MQ=255)                                                             aCCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACt                                                                                      <  1:32777/149‑1 (MQ=255)                                                               cAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTc                                                                                                        >  7:273523/1‑131 (MQ=255)                                                               cAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTc                                                                                                        <  8:273523/131‑1 (MQ=255)                                                                  gCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTgcg                                                                                 >  8:65493/1‑149 (MQ=255)                                                                      aGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAgc                                                                             <  4:267087/149‑1 (MQ=255)                                                                              cGGTATTCGGTGCTGCGTGCCCGCCGCTGGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTc                                                                     >  1:185618/1‑149 (MQ=255)                                                                                gTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGt                                                                   >  2:235833/1‑149 (MQ=255)                                                                                 tATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGtt                                                                  <  2:163973/149‑1 (MQ=255)                                                                                 tATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGtt                                                                  <  5:243963/149‑1 (MQ=255)                                                                                          ctgcGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCt                                                          <  6:194035/148‑1 (MQ=255)                                                                                              gTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTcc                                                     >  4:145609/1‑149 (MQ=255)                                                                                                  ccgccgCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCa                                                <  7:65493/149‑1 (MQ=255)                                                                                                   cgccgcTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAg                                               <  6:60661/149‑1 (MQ=255)                                                                                                   cgccgcTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAg                                               <  4:33511/149‑1 (MQ=255)                                                                                                        cTCGTGATCGACGTAGTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCGAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTgg                                                                <  5:76332/128‑1 (MQ=255)                                                                                                        cTCGTGATAGACGTACTCGGTTACGGCATTGAGCAGACCCAAGGCCGTGACGAGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTAAAGCTCC‑‑AGCACTTTGCGCAGCGCGCGCTCGTAgg                                                                >  6:76332/1‑128 (MQ=255)                                                                                                           gTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCgg                                       >  5:148012/1‑149 (MQ=255)                                                                                                              aTCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTc                                     <  3:145609/148‑1 (MQ=255)                                                                                                                       cTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGttt                           >  7:297244/1‑149 (MQ=255)                                                                                                                       cTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGttt                           >  1:90838/1‑149 (MQ=255)                                                                                                                        tCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTc                          >  2:209773/1‑149 (MQ=255)                                                                                                                          ggTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCg                         >  6:146812/1‑148 (MQ=255)                                                                                                                          ggTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCg                         >  7:205220/1‑148 (MQ=255)                                                                                                                            ttACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGcac                      <  2:90838/149‑1 (MQ=255)                                                                                                                            ttACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGca                       >  7:51178/1‑148 (MQ=255)                                                                                                                                   aTTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGt               <  8:51178/149‑1 (MQ=255)                                                                                                                                   aTTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGt               >  2:225607/1‑149 (MQ=255)                                                                                                                                   aTTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGt               >  2:46884/1‑149 (MQ=255)                                                                                                                                    ttGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGtt              <  5:22085/149‑1 (MQ=255)                                                                                                                                    ttGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGtt              >  8:88902/1‑149 (MQ=255)                                                                                                                                          aGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCAtc          >  8:94673/1‑146 (MQ=255)                                                                                                                                          aGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATgaa        <  6:205898/149‑1 (MQ=255)                                                                                                                                              cccAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCGAGCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATgaagaa     <  1:235833/149‑1 (MQ=255)                                                                                                                                                cAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCCGGTGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGaagaag    >  1:256917/1‑149 (MQ=255)                                                                                                                                                 AGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGcc  <  6:187496‑M1/148‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                       AGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCCGCCGCTCGTGATCGACGTACTCGGTTACGGCATTGAGCAGACCCCAGGCCGTGCCGCGTGCGGAGTCCAGCTGGCTGCCACGACCACGGCCTTCGTACAGCTCC‑‑TGCACTTTGCGCAGCGCGCGCTCGTTGGGTAGCTGTTCCG‑GCAGGGCGCCGGTCGGGCTGGTTTCGCACATCACGTTCATGAAGAAGCC  >  NC_002947/2844722‑2845013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.