| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2845382 = | 37 (0.710) | 4 (0.080) | 4/254 | NT | 10.3% | coding (367/1029 nt) | PP_2496 | hypothetical protein |
| ? | NC_002947 | 2845422 = | 34 (0.680) | coding (327/1029 nt) | PP_2496 | hypothetical protein | |||||
CCATCGGCCATCTGGGCGCGATCCACTCCTTCCCCGAGCAGAAGGTGCTCTACCGTTCGGACACCAAGGCACCGCTGTCAGTGGTCTCGCAGCGCTATCACACCGTGCAGCCTCGGGAAGTACTCGAATTTTATCGTGACCTGACCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2845531‑2845382‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaggCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCCGATGGCGTCCGACTTGAAGTGCACTGGGCTTTCCATGATCTGC > NC_002947/2845422‑2845569 CCATCGGCCATCTGGGCGCGATCCACTCCTTCCCCGAGCAGAAGGTGCTCTACCGTTCGGACACCAAGGCACCGCTGTCAGTGGTCTCGCAGCGCTATCACACCGTGCAGCCTCGGGAAGTACTCGAATTTTATCGTGACCTGACCGAG < 8:190058/149‑1CCATCGGCCATCTGGGCGCGATCCACTCCTTCCCCGAGCAGAAGGTGCTCTACCGTTCGGACACCAAGGCACCGCTGTCAGTGGTCTCGCAGCGCTATCACACCGTGCAGCCTCGGGAAGTACTCGAATTTTATCGTGACCTGACCGAG < 8:194990/149‑1 CATCGGCCATCTGGGCGCGATCCACTCCTTCCCCGAGCAGAAGGTGCTCTACCGTTCGGACACCAAGGCACCGCTGTCAGTGGTCTCGCAGCGCTATCACACCGTGCAGCCTCGGGAAGTACTCGAATTTTATCGTGACCTGACCGAGG > 5:256735/1‑149 GCAGCCTCGGGAAGTACTCGAATTTTAACGTGACCTGACCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTCCCTTGGTGTCCGAACGGAAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCC > 1:180816/1‑149 CCTCGGGAAGTACTCGAATTTTATCGTGACCTGACCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGC > 3:260675/1‑135 CCTCGGGAAGTACTCGAATTTTATCGTGACCTGACCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGC < 4:260675/135‑1 gtAGTACTCGTATTTTATCGTGACCTGACCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTTGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCCGATGGCGTCC < 2:180816/147‑1 GCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCCGATGGCGTCCGACTTGAAGTGCACTGGGCTTTCCATGATCTGC < 6:114135/149‑1 CCATCGGCCATCTGGGCGCGATCCACTCCTTCCCCGAGCAGAAGGTGCTCTACCGTTCGGACACCAAGGCACCGCTGTCAGTGGTCTCGCAGCGCTATCACACCGTGCAGCCTCGGGAAGTACTCGAATTTTATCGTGACCTGACCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2845531‑2845382‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaggCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCCGATGGCGTCCGACTTGAAGTGCACTGGGCTTTCCATGATCTGC > NC_002947/2845422‑2845569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |