New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2845382 =	37 (0.710)	4 (0.080)	4/254	NT	10.3%	coding (367/1029 nt)	PP_2496	hypothetical protein
	?	NC_002947	2845422 =	34 (0.680)					coding (327/1029 nt)	PP_2496	hypothetical protein

AGAGTGCCGTCACAGGAAGTGGCCAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCCGATG  >  NC_002947/2845234‑2845530                                                                                                                                                     |                                                                                                                                                     gcagatcatggaaagcccagtgcacttcaagtcggacgccatcggccatctgggcgcgatccactccttccccgagcagaaggtgctctaccgttcggacaccaaggcaccgctgtcagtggtctcgcagcgctatcacaccgtgcagc                                                                                                                                                      <  6:114135‑M1/1‑1 (MQ=255)         gTCACAGGAAGTGGCCAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCggt                                                                                                                                                >  5:55020/1‑147 (MQ=255)            acaGGAAGTGGCCAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCggtcaggt                                                                                                                                           <  8:50960/149‑1 (MQ=255)                   gTGGCCAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGAt                                                                                                                                     >  2:59132/1‑148 (MQ=255)                     ggCCAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATaa                                                                                                                                   >  3:240498/1‑148 (MQ=255)                      gCCAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCTTAGCCGGAGACCTCGGTCAGGTCACGATaaaa                                                                                                                                 >  7:246486/1‑149 (MQ=255)                        cAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAAtt                                                                                                                               >  8:18644/1‑149 (MQ=255)                           catcagATAGCCATTCACCTGGTCTTTGCCATTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCATAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGa                                                                                                                            <  8:246486/146‑1 (MQ=255)                                 aTAGCCATTCACCTGGTCGTTGTCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACtt                                                                                                                      >  3:291607/1‑149 (MQ=255)                                  ggacgccatcggccatctgggcgcgatccactccttccccgagcagaaggtgctcaaccgttcggacaccaaggcaccgctgtcagtggtctcgcagcgctatcacaccgtgcagCCTCGGTCAGGTCACGATAAAATACGAGTactac                                                                                                                     <  2:180816‑M1/34‑3 (MQ=255)                                            ggccatctgggcgcgatccactccttccccgagcagaaggtgctcttccgttcggacaccaagggaccgctgtcagtggtctcgcagcgctatcacaccgtgcagCCTCGGTCAGGTCACGTTAAAATTCGAGTACTTCCCGAGGCTGc                                                                                                           >  1:180816‑M1/106‑149 (MQ=255)                                                   gTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGgtgt                                                                                                    >  4:45780/1‑149 (MQ=255)                                                   gTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGAACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATCAAATTCGAGTACTTCCCGAGGCTGCACGgtgt                                                                                                    >  8:302024/1‑149 (MQ=255)                                                      gcgcgatccactccttccccgagcagaaggtgctctaccgttcggacaccaaggcaccgctgtcagtggtctcgcagcgctatcacaccgtgcagCCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAgg                                                                                                               <  4:260675‑M1/40‑1 (MQ=255)                                                      gcgcgatccactccttccccgagcagaaggtgctctaccgttcggacaccaaggcaccgctgtcagtggtctcgcagcgctatcacaccgtgcagCCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAgg                                                                                                               >  3:260675‑M1/96‑135 (MQ=255)                                                      gCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGa                                                                                                  <  4:240498/148‑1 (MQ=255)                                                              gTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTg                                                                                          <  3:45780/148‑1 (MQ=255)                                                               tGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGc                                                                                         <  4:291607/148‑1 (MQ=255)                                                               tGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGc                                                                                         >  3:200611/1‑148 (MQ=255)                                                                   gcgcCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGAc                                                                                    >  6:39168/1‑149 (MQ=255)                                                                        cTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCa                                                                                  >  8:288719/1‑146 (MQ=255)                                                                        cTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCa                                                                                  <  7:288719/146‑1 (MQ=255)                                                                              aGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCg                                                                         <  1:59132/149‑1 (MQ=255)                                                                                      ccAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTg                                                                 <  5:39168/149‑1 (MQ=255)                                                                                       cAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTgg                                                                >  6:119651/1‑149 (MQ=255)                                                                                            cccAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGc                                                                                         <  6:130602/119‑1 (MQ=255)                                                                                            cccAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGc                                                                                         >  5:130602/1‑119 (MQ=255)                                                                                              cAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGCCCACTGACAGCGGTGCCTTGGTGTCCgc                                                         >  4:240196/1‑148 (MQ=255)                                                                                              cAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCg                                                          >  5:311354/1‑148 (MQ=255)                                                                                                   cTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACgg                                                     >  6:256735/1‑148 (MQ=255)                                                                                                         aCCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCa                                              >  3:227757/1‑149 (MQ=255)                                                                                                           cGCCCTTGAGCACGCCAGCGGTCTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCAcc                                            >  7:49843/1‑149 (MQ=255)                                                                                                            gCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCAcc                                            >  7:226783/1‑148 (MQ=255)                                                                                                                          cAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAg                             <  4:227757/149‑1 (MQ=255)                                                                                                                             cGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAg                          <  7:18644/149‑1 (MQ=255)                                                                                                                               gTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTg                        <  5:119651/149‑1 (MQ=255)                                                                                                                                  tCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCtt                                          <  5:69908/128‑1 (MQ=255)                                                                                                                                  tCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACAtt                                          >  6:69908/1‑128 (MQ=255)                                                                                                                                        tCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGt                                                    <  7:188642/112‑1 (MQ=255)                                                                                                                                        tCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGt                                                    >  8:188642/1‑112 (MQ=255)                                                                                                                                          gTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGcc               <  6:311354/147‑1 (MQ=255)                                                                                                                                              ccGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATg         >  5:114135/1‑149 (MQ=255)                                                                                                                                                ggAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGc       <  4:200611/149‑1 (MQ=255)                                                                                                                                                    aCCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGTCCGAt   <  8:226783/149‑1 (MQ=255)                                                                                                                                                     CCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCCGATg  >  5:256735‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AGAGTGCCGTCACAGGAAGTGGCCAACAGCAGATAGCCATTCACCTGGTCGTTGCCCTTGAGTGCAGCGCCCTGCCCAGTACGCGCCAGCGCCCAGAACTTGCGACCGCCCTTGAGCACGCCAGCGGTTTCCAGCTCGTAGCCGGAGACCTCGGTCAGGTCACGATAAAATTCGAGTACTTCCCGAGGCTGCACGGTGTGATAGCGCTGCGAGACCACTGACAGCGGTGCCTTGGTGTCCGAACGGTAGAGCACCTTCTGCTCGGGGAAGGAGTGGATCGCGCCCAGATGGCCGATG  >  NC_002947/2845234‑2845530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.