| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3011750 = | 44 (0.850) | 4 (0.080) | 4/260 | NT | 9.2% | coding (811/1614 nt) | bcsG | endoglucanase |
| ? | NC_002947 | 3011789 = | 36 (0.710) | coding (850/1614 nt) | bcsG | endoglucanase | |||||
CGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCCGCTGTGGTTGAGCAAGGTGTTGCTCTGGAAACCCAGCCGGGCCAGGTTCTGGAACAACAGGCACTGCTCCGGGGCCGGTTGGTACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3011898‑3011750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGACG > NC_002947/3011789‑3011936 CGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCCGCTGTGGTTGAGCAAGGTGTTGCTCTGGAAACCCAGCCGGGCCAGGTTCTGGAACAACAGGCACTGCTCCGGGGCCGGTTGGTACAG > 2:75106/1‑149 TTCTGGAACAACAGGCACTGCTCCGGGGCCGGTTGGTACAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGG < 5:237693/95‑1 TTCTGGAACAACAGGCACTGCTCCGGGGCCGGTTGGTACAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGG > 6:237693/1‑95 CTGGAACAACAGGCACTGCTCCGGGGCCGGTTGGTACAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCC > 7:33242/1‑121 CTGGAACAACAGGCACTGCTCCGGGGCCGGTTGGTACAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCC < 8:33242/121‑1 CAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGA > 2:203705/1‑149 CAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTACGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGA > 8:63922/1‑149 GAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGACG < 4:174992/149‑1 CGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCCGCTGTGGTTGAGCAAGGTGTTGCTCTGGAAACCCAGCCGGGCCAGGTTCTGGAACAACAGGCACTGCTCCGGGGCCGGTTGGTACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3011898‑3011750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGACG > NC_002947/3011789‑3011936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |