New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3011750 =	44 (0.850)	4 (0.080)	4/260	NT	9.2%	coding (811/1614 nt)	bcsG	endoglucanase
	?	NC_002947	3011789 =	36 (0.710)					coding (850/1614 nt)	bcsG	endoglucanase

TCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGACG  >  NC_002947/3011642‑3011936                                                                                                                                                    |                                                                                                                                                    tCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGa                                                                                                                                                     >  8:105736/1‑148 (MQ=255)       aTGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGc                                                                                                                                              <  5:120868/149‑1 (MQ=255)         ggACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGccc                                                                                                                                            >  2:108366/1‑149 (MQ=255)             gTGATCTTCGACCAGTTCAACTCAGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAAc                                                                                                                                                   >  1:78671/1‑138 (MQ=255)             gTGATCTTCGACCAGTTCAACTCAGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAAc                                                                                                                                                   <  2:78671/138‑1 (MQ=255)                      gACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCa                                                                                                                               <  7:105736/149‑1 (MQ=255)                       aCCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCag                                                                                                                              <  4:44846/149‑1 (MQ=255)                            ttCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCTGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                                                         >  3:278146/1‑149 (MQ=255)                            ttCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                                                         >  8:31487/1‑149 (MQ=255)                               aaCTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAacac                                                                                                                      >  6:187740/1‑149 (MQ=255)                               aaCTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAacac                                                                                                                      >  3:83211/1‑149 (MQ=255)                                aCTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACAcc                                                                                                                     <  1:108366/149‑1 (MQ=255)                                  acGGCCACATCCAACAGCGGCACGGCCCAAATCCGTGTGCTGAGTTCCAGCTGTGGGCACTCCTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGAGCATGTTGATCCAGAACCTGGCCCCCCAGGGTATCCAGAGCAACACCtt                                                                                                                   >  4:317638/2‑149 (MQ=255)                                                cAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                                                         <  8:215585/129‑1 (MQ=255)                                                cAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                                                         >  7:215585/1‑129 (MQ=255)                                                  gCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGc                                                                                                   >  7:231305/1‑149 (MQ=255)                                                       ccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGaa                                                                                                                                                    >  6:237693‑M1/55‑95 (MQ=255)                                                       ccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGaa                                                                                                                                                    <  5:237693‑M1/41‑1 (MQ=255)                                                          gccGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGa                                                                                           <  5:187740/149‑1 (MQ=255)                                                            cGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGAc                                                                                          >  7:79924/1‑148 (MQ=255)                                                              cAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAAc                                                                                       <  2:263547/149‑1 (MQ=255)                                                               aaTCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACt                                                                                      >  5:331650/1‑149 (MQ=255)                                                                         ctgcGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGa                                                                            <  7:31487/149‑1 (MQ=255)                                                                                  aGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCAACa                                                                          >  3:8171/1‑142 (MQ=255)                                                                                  aGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCAACa                                                                          <  4:8171/142‑1 (MQ=255)                                                                                       tgGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCcagcag                                                               <  4:141939/148‑1 (MQ=255)                                                                                          gCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCa                                                           >  3:174992/1‑149 (MQ=255)                                                                                              tcgtcgCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTc                                                                                    <  8:203222/120‑1 (MQ=255)                                                                                              tcgtcgCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTc                                                                                    >  7:203222/1‑120 (MQ=255)                                                                                                  cgCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCaa                                                   >  8:299443/1‑149 (MQ=255)                                                                                                   gCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAAc                                                  >  1:75106/1‑149 (MQ=255)                                                                                                           ttctggaacaacaggcactgctccggggccggttggtacagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCgg                                                                                                >  6:237693‑M2/42‑95 (MQ=255)                                                                                                           ttctggaacaacaggcactgctccggggccggttggtacagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCgg                                                                                                <  5:237693‑M2/54‑1 (MQ=255)                                                                                                            ccTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATgc                                         <  7:299443/149‑1 (MQ=255)                                                                                                             ctggaacaacaggcactgctccggggccggttggtacagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTAccc                                                                    <  8:33242‑M2/82‑1 (MQ=255)                                                                                                             ctggaacaacaggcactgctccggggccggttggtacagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTAccc                                                                    >  7:33242‑M2/40‑121 (MQ=255)                                                                                                             CTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATgcg                                        >  2:75106‑M1/1‑149 (MQ=255)                                                                                                                    aaCCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCACAACCGGGCATGCGCAATAcc                                 >  2:312384/1‑149 (MQ=255)                                                                                                                          ccccGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTc                           <  8:231305/149‑1 (MQ=255)                                                                                                                          ccccGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTc                           >  1:81434/1‑149 (MQ=255)                                                                                                                               gAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACg                      <  8:79924/149‑1 (MQ=255)                                                                                                                                aGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACgg                     <  4:83211/149‑1 (MQ=255)                                                                                                                                        cTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACgg                     >  2:193361/1‑141 (MQ=255)                                                                                                                                        cTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACgg                     <  1:193361/141‑1 (MQ=255)                                                                                                                                        cTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCACAACCGGGCATGCGCAATACCGACTTCCCACGGGCACtggt             <  1:312384/149‑1 (MQ=255)                                                                                                                                          gttgttCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACtggtgg           >  5:62994/1‑149 (MQ=255)                                                                                                                                             gttCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGAc                              >  1:159701/1‑127 (MQ=255)                                                                                                                                             gttCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGAc                              <  2:159701/127‑1 (MQ=255)                                                                                                                                               tCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTc      >  5:187657/1‑149 (MQ=255)                                                                                                                                                ccAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTc      <  6:187657/148‑1 (MQ=255)                                                                                                                                                 cagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGa    >  2:203705‑M2/4‑149 (MQ=255)                                                                                                                                                 cagAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTACGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGa    >  8:63922‑M2/4‑149 (MQ=255)                                                                                                                                                   gAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGACg  <  4:174992‑M2/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    TCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCGCAATACCGACTTCCCACGGGCACTGGTGGGCTTCGACG  >  NC_002947/3011642‑3011936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.