New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3011750 =	44 (0.850)	4 (0.080)	4/260	NT	9.2%	coding (811/1614 nt)	bcsG	endoglucanase
	?	NC_002947	3011789 =	36 (0.710)					coding (850/1614 nt)	bcsG	endoglucanase

TGACCTGTCCGCCGTGGGGCTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCG  >  NC_002947/3011602‑3011898                                                                                                                                                     |                                                                                                                                                     tGACCTGTCCGCCGTGGGGCTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGcc                                                                                                                                                      <  5:322738/149‑1 (MQ=255) cgtcgaagcccaccagtgcccgtgggaagtcggtattgcgcatgcccggttgcggcatgcgctgctgggtaatgtcgccgatgaagttgtcgaaccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttc                                                                                                                                                      <  4:174992‑M1/1‑1 (MQ=255)  gACCTGTCCGCCGTGGGGCTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGAGGGCAGTCGTCGCACGCTGGCCt                                                                                                                                                     >  7:151407/1‑149 (MQ=255)   tcgaagcccaccagtgcccgtgggaagtcggtattgcgcatgcccggttgcggcatgcgctgctgggtaatgtcgccgatgaagttgtcgtaccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTg                                                                                                                                                    >  8:63922‑M1/147‑149 (MQ=255)   tcgaagcccaccagtgcccgtgggaagtcggtattgcgcatgcccggttgcggcatgcgctgctgggtaatgtcgccgatgaagttgtcgaaccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTg                                                                                                                                                    >  2:203705‑M1/147‑149 (MQ=255)    ccTGTCCGCCGTGGGGCTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTg                                                                                                                                                    >  4:242130/1‑148 (MQ=255)     cTGTCCGCCGTGGGGCTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTa                                                                                                                                                  <  7:259585/149‑1 (MQ=255)                   gCTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCg                                                                                                                                     >  3:44846/1‑148 (MQ=255)                    cTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGa                                                                                                                                   <  3:242130/149‑1 (MQ=255)                    cTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGa                                                                                                                                   <  3:64718/149‑1 (MQ=255)                         ggACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGt                                                                                                                              <  4:290444/149‑1 (MQ=255)                          gACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTg                                                                                                                             >  6:120868/1‑149 (MQ=255)                           aCAAACCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTAGGCGACCTCCTACAGCGGCCAGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGTGCAGTCGTCGCACGATGGCCTGTACCAACCGGCCCCGGAGCAGGGc                                                                                                                            >  3:285961/1‑149 (MQ=255)                             aaCCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGAGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCt                                                                                                                          <  8:151407/149‑1 (MQ=255)                              aCCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCtg                                                                                                                         <  5:88780/149‑1 (MQ=255)                                ccACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTg                                                                                                                             >  6:311021/1‑143 (MQ=255)                                ccACTGTTGTCGCGCATGGACGTGATCTTCCACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTg                                                                                                                             <  5:311021/143‑1 (MQ=255)                                   cTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTgttgtt                                                                                                                    <  4:300323/149‑1 (MQ=255)                                      ttgtCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACTCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTcc                                                                                                                  <  5:229748/148‑1 (MQ=255)                                      ttgtCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTcc                                                                                                                  <  6:9811/148‑1 (MQ=255)                                         tCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGa                                                                                                               >  8:105736/1‑148 (MQ=255)                                               aTGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGc                                                                                                        <  5:120868/149‑1 (MQ=255)                                                 ggACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGccc                                                                                                      >  2:108366/1‑149 (MQ=255)                                                     gTGATCTTCGACCAGTTCAACTCAGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAAc                                                                                                             >  1:78671/1‑138 (MQ=255)                                                     gTGATCTTCGACCAGTTCAACTCAGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAAc                                                                                                             <  2:78671/138‑1 (MQ=255)                                                              gACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCa                                                                                         <  7:105736/149‑1 (MQ=255)                                                               aCCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCag                                                                                        <  4:44846/149‑1 (MQ=255)                                                                   gggtaatgtcgccgatgaagttgtcgaaccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAg                                                                                                                <  8:33242‑M1/39‑1 (MQ=255)                                                                   gggtaatgtcgccgatgaagttgtcgaaccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAg                                                                                                                >  7:33242‑M1/83‑121 (MQ=255)                                                                    ttCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCTGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                   >  3:278146/1‑149 (MQ=255)                                                                    ttCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                   >  8:31487/1‑149 (MQ=255)                                                                       aaCTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAacac                                                                                >  3:83211/1‑149 (MQ=255)                                                                       aaCTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAacac                                                                                >  6:187740/1‑149 (MQ=255)                                                                        aCTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACAcc                                                                               <  1:108366/149‑1 (MQ=255)                                                                          acGGCCACATCCAACAGCGGCACGGCCCAAATCCGTGTGCTGAGTTCCAGCTGTGGGCACTCCTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGAGCATGTTGATCCAGAACCTGGCCCCCCAGGGTATCCAGAGCAACACCtt                                                                             >  4:317638/2‑149 (MQ=255)                                                                                     ctACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTg                                                                                                                                                    <  7:139755/67‑1 (MQ=255)                                                                                     ctACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTg                                                                                                                                                    >  8:139755/1‑67 (MQ=255)                                                                                     ctACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGcc                                                                                                                           <  5:261866/92‑1 (MQ=255)                                                                                     ctACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCACTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGcc                                                                                                                           >  6:261866/1‑92 (MQ=255)                                                                                        cAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                   <  8:215585/129‑1 (MQ=255)                                                                                        cAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCaa                                                                                   >  7:215585/1‑129 (MQ=255)                                                                                          gCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGc                                                             >  7:231305/1‑149 (MQ=255)                                                                                               ccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGaa                                                                                                              >  6:237693‑M1/55‑95 (MQ=255)                                                                                               ccggccgctgtggttgagcaaggtgttgctctggaaacccagccgggccaggttCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGaa                                                                                                              <  5:237693‑M1/41‑1 (MQ=255)                                                                                                  gccGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGa                                                     <  5:187740/149‑1 (MQ=255)                                                                                                    cGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGAc                                                    >  7:79924/1‑148 (MQ=255)                                                                                                      cAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAAc                                                 <  2:263547/149‑1 (MQ=255)                                                                                                       aaTCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACt                                                >  5:331650/1‑149 (MQ=255)                                                                                                                 ctgcGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGa                                      <  7:31487/149‑1 (MQ=255)                                                                                                                          aGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCAACa                                    <  4:8171/142‑1 (MQ=255)                                                                                                                          aGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCAACa                                    >  3:8171/1‑142 (MQ=255)                                                                                                                               tgGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCcagcag                         <  4:141939/148‑1 (MQ=255)                                                                                                                                  gCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCa                     >  3:174992/1‑149 (MQ=255)                                                                                                                                      tcgtcgCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTc                                              >  7:203222/1‑120 (MQ=255)                                                                                                                                      tcgtcgCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTc                                              <  8:203222/120‑1 (MQ=255)                                                                                                                                          cgCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCaa             >  8:299443/1‑149 (MQ=255)                                                                                                                                           gCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAAc            >  1:75106/1‑149 (MQ=255)                                                                                                                                                    ccTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATgc   <  7:299443/149‑1 (MQ=255)                                                                                                                                                     CTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATgcg  >  2:75106‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TGACCTGTCCGCCGTGGGGCTGCGGGACAACCCACTGTTGTCGCGCATGGACGTGATCTTCGACCAGTTCAACTCGGCGACCTCCTACAGCGGCCCGGCCGCAATCCGTGTGCTGCGTGCCAGCTGTGGGCAGTCGTCGCACGCTGGCCTGTACCAACCGGCCCCGGAGCAGTGCCTGTTGTTCCAGAACCTGGCCCGGCTGGGTTTCCAGAGCAACACCTTGCTCAACCACAGCGGCCGGTTCGACAACTTCATCGGCGACATTACCCAGCAGCGCATGCCGCAACCGGGCATGCG  >  NC_002947/3011602‑3011898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.