| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3101541 = | 47 (0.900) | 5 (0.100) | 5/254 | NT | 10.5% | coding (175/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 3101574 = | 40 (0.800) | coding (208/807 nt) | PP_2711 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
ATGTCCAATAGCTCGTCCAACGCATACTCATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCG‑‑CAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3101689‑3101541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGACATCAACCTGAAGGCTCCCCTGCAACTGACCCGC > NC_002947/3101574‑3101720 ATGTCCAATAGCTCGTCCAACGCATACTCATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCG‑‑CAGGT < 2:21378/148‑1 CTCGATGACCTGTTCGCGCCCTGACGGGCTGCG‑‑CAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGC > 3:289942/1‑121 CTCGATGACCTGTTCGCGCCCTGACGGGCTGCG‑‑CAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGC < 4:289942/121‑1 GATGACCTGTTCGCGCCCTGACGGGCTGCG‑‑CAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGA > 8:161718/1‑149 ACCTGTTCGCGCCCTGACGGGCTGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAT > 3:176798/1‑121 ACCTGTTCGCGCCCTGACGGGCTGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAT < 4:176798/121‑1 GGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGACATCAACCTGAAGGCTCCCCTGCAACTGACCC < 7:161718/149‑1 TCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGACATCAACCTGAAGGCTCCCCTGCAACTGACCCGC > 4:317177/1‑149 ATGTCCAATAGCTCGTCCAACGCATACTCATCCAGCTGGTCGAGCAGAGCGAAGCGATTCACGCCAGCAGCGTTGATCAGCACATTCACAGCCCCCATCTCGCGTGCCCGCTCGATGACCTGTTCGCGCCCTGACGGGCTGCG‑‑CAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3101689‑3101541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATTGGACATCAACCTGAAGGCTCCCCTGCAACTGACCCGC > NC_002947/3101574‑3101720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |