New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3101541 =	47 (0.900)	5 (0.100)	5/254	NT	10.5%	coding (175/807 nt)	PP_2711	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	3101574 =	40 (0.800)					coding (208/807 nt)	PP_2711	short‑chain dehydrogenase/reductase family oxidoreductase

CTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATT  >  NC_002947/3101394‑3101683                                                                                                                                                    |                                                                                                                                                 gcgggtcagttgcaggggagccttcaggttgatgtccaatagctcgtccaacgcatactcatccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatGa                                                                                                                                                 >  4:317177‑M1/148‑149 (MQ=255)   gggtcagttgcaggggagccttcaggttgatgtccaatagctcgtccaacgcatactcatccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatGAcc                                                                                                                                               <  7:161718‑M1/4‑1 (MQ=255)    aCCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGAc                                                                                                                                                <  5:15724/147‑1 (MQ=255)    aCCGGCGCCAGGGGGGGCATAGGCCTGGAATTGGCTGACCAGCTCTGCGCTGCCGGTTCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCt                                                                                                                                              <  5:323092/149‑1 (MQ=255)                   ggCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAgg                                                                                                                             >  5:41080/1‑149 (MQ=255)                     cATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGgc                                                                                                                           >  5:165520/1‑149 (MQ=255)                       tAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGgcgc                                                                                                                         <  6:165520/149‑1 (MQ=255)                       tAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGgcgc                                                                                                                         <  2:176522/149‑1 (MQ=255)                       tAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGAGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGgcgc                                                                                                                         <  8:290346/149‑1 (MQ=255)                           ccTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCTGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGaa                                                                                                                      >  1:253267/1‑148 (MQ=255)                                   tccaatagctcgtccaacgcatactcatccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATc                                                                                                             >  8:161718‑M1/114‑149 (MQ=255)                                         aaCAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCgg                                                                                                       >  5:79327/1‑149 (MQ=255)                                           cAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCggg                                                                                                      >  6:205895/1‑148 (MQ=255)                                               tctGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGccc                                                                                                                                   <  4:148928/115‑1 (MQ=255)                                               tctGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGccc                                                                                                                                   >  3:148928/1‑115 (MQ=255)                                                   cgcTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGGCAGGGCGCGAACAGGTCATCGAGCGGGCAcgc                                                                                                 >  6:207882/1‑145 (MQ=255)                                                         cGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATggggg                                                                                       >  7:169269/1‑149 (MQ=255)                                                           gTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCt                                                                                     >  2:307058/1‑149 (MQ=255)                                                           gTGCCCAGGTGTTGGCCGTCAGGCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCt                                                                                     <  5:26624/149‑1 (MQ=255)                                                             atccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatGACCTGTTCGCAGCCCGTCAGGGCGCGAACAGGt                                                                                                                 <  4:176798‑M1/34‑1 (MQ=255)                                                             atccagctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatGACCTGTTCGCAGCCCGTCAGGGCGCGAACAGGt                                                                                                                 >  3:176798‑M1/88‑121 (MQ=255)                                                              cccAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCtgt                                                                                   >  7:286677/1‑148 (MQ=255)                                                                 aGGTGTTGGCCGTCAGTCGGCATATGTGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAAt                                                                               >  1:175196/1‑149 (MQ=255)                                                                  gctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAg                                                                                                          >  3:289942‑M1/83‑121 (MQ=255)                                                                  gctggtcgagcagagcgaagcgattcacgccagcagcgttgatcagcacattcacagcccccatctcgcgtgcccgctcgatGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAg                                                                                                          <  4:289942‑M1/39‑1 (MQ=255)                                                                      ttGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGTTACACTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTAAGGGCGCGAACAGGTCATCGAGCGCGCACGCGAGATGGGGGCTGTGAAtgtgat                                                                          >  7:172269/1‑147 (MQ=255)                                                                       tGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTg                                                                         <  5:207882/149‑1 (MQ=255)                                                                         gCCGTCAGTCGGCATATGGGTAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGAt                                                                       <  7:40707/149‑1 (MQ=255)                                                                                 tCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACgctg                                                               >  7:35867/1‑149 (MQ=255)                                                                                   ggCATTTGGTCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCTGCAGGGCGCTAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACgctgc                                                              <  6:195393/148‑1 (MQ=255)                                                                                      atatGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCtgt                                                                                   <  1:169204/124‑1 (MQ=255)                                                                                      atatGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCtgt                                                                                   >  2:169204/1‑124 (MQ=255)                                                                                         tGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGt                                                        <  8:35867/148‑1 (MQ=255)                                                                                               aGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAAtcgc                                                 >  8:67361/1‑149 (MQ=255)                                                                                                          cTGATGAACCGGTACCCTGATAGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCt                                      >  5:28092/1‑149 (MQ=255)                                                                                                             atgaACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAAtcg                                                  >  5:331712/1‑134 (MQ=255)                                                                                                             atgaACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAAtcg                                                  <  6:331712/134‑1 (MQ=255)                                                                                                             atgaACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTc                                     <  8:169269/147‑1 (MQ=255)                                                                                                                aaCCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGAcc                                 <  5:205895/148‑1 (MQ=255)                                                                                                                 aCCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCTTCAGGGCGCGAACAGGTCATCGAGCGGGCACGAGAGATGGGGTCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAg                               <  2:322610/149‑1 (MQ=255)                                                                                                                        cccTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAt                         <  2:175196/148‑1 (MQ=255)                                                                                                                         ccTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCtg                                                                                    >  8:294022/1‑88 (MQ=255)                                                                                                                         ccTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCtg                                                                                    <  7:294022/88‑1 (MQ=255)                                                                                                                         ccTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGAt                         >  6:309141/1‑147 (MQ=255)                                                                                                                         ccTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGa                       <  7:67361/149‑1 (MQ=255)                                                                                                                          cTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAg                      >  4:75138/1‑149 (MQ=255)                                                                                                                             aTCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTAt                   <  6:41080/149‑1 (MQ=255)                                                                                                                                ggcTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGc                 <  8:286677/146‑1 (MQ=255)                                                                                                                                     cgcTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGtt              <  2:253267/146‑1 (MQ=255)                                                                                                                                     cgcTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGtt              <  5:309141/146‑1 (MQ=255)                                                                                                                                     cgcTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGtt              <  1:307058/146‑1 (MQ=255)                                                                                                                                          gCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGc                 <  7:93418/138‑1 (MQ=255)                                                                                                                                          gCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGc                 >  8:93418/1‑138 (MQ=255)                                                                                                                                            aggaggCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTa    >  2:47524/1‑149 (MQ=255)                                                                                                                                            aggaggCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTa    >  2:165142/1‑149 (MQ=255)                                                                                                                                              gaggCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGTTGAGTATGCGTTGGACGAGCTAtt  <  6:79327/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                 CTCACCGGCGCCAGTGGGGGCATAGGCCTGGAATTGGCTGAACAGCTCTGCGCTGCCGGTGCCCAGGTGTTGGCCGTCAGTCGGCATATGGGCAAGCTGGCTGGCCTGATGAACCGGTACCCTGATCGTCTGCGCTGGCAGGAGGCCGACCTG‑‑CGCAGCCCGTCAGGGCGCGAACAGGTCATCGAGCGGGCACGCGAGATGGGGGCTGTGAATGTGCTGATCAACGCTGCTGGCGTGAATCGCTTCGCTCTGCTCGACCAGCTGGATGAGTATGCGTTGGACGAGCTATT  >  NC_002947/3101394‑3101683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.