New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3271705 =	36 (0.690)	4 (0.080)	4/252	NT	10.2%	coding (380/1953 nt)	PP_2869	FMN‑binding oxidoreductase
	?	NC_002947	3271743 =	36 (0.730)					coding (342/1953 nt)	PP_2869	FMN‑binding oxidoreductase

CACTGACGATGCCTGCATCGACGGCTACCGCCAGCTTGCCGAGGCCTGCCATGCGCACGGCACCGTGGTGCTGTCGCAACTGTTTCACCCTGGGCGGGAGATCATGGAGTCGGCAGACGGCCTGTTGGCGGTAGCCTACTCGGCGTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3271854‑3271705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtctgcCG‑ACTCCATGATCTCCCGCCCAGGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGGTAGCCGTCGATGCAGGCATCGTCAGTGGCCATTAGCACATGCGAGGTGTAGCGGGCACTG  >  NC_002947/3271743‑3271887                                                                                                                                                                                                                                                                                                          CACTGACGATGCCTGCATCGACGGCTACCGCCAGCTTGCCGAGGCCTGCCATGCGCACGGCACCGTGGTGCTGTCGCAACTGTTTCACCCTGGGCGGGAGATCATGGAGTCGGCAGACGGCCTGTTGGCGGTAGCCTACTCGGCGTCTG                                                                                                                                                     >  3:71998/1‑149     GACGATGCCTGCATCGACGGCTACCGCCAGCTTGCCGAGGCCTGCCATGCGCACGGCACCGTGGTGCTGTCGCAACTGTTTCACCCTGGGCGGGAGATCATGGAGTCGGCAGACGGCCTGTTGGCGGTAGCCTACTCGGC                                                                                                                                                          >  5:120867/1‑140     GACGATGCCTGCATCGACGGCTACCGCCAGCTTGCCGAGGCCTGCCATGCGCACGGCACCGTGGTGCTGTCGCAACTGTTTCACCCTGGGCGGGAGATCATGGAGTCGGCAGACGGCCTGTTGGCGGTAGCCTACTCGGC                                                                                                                                                          <  6:120867/140‑1                                                                                     TCACCCTGGGCGGGAGATCATGGAGTCGGCAGACGGCCTGTTGGCGGTAGCCTACTCGGCGTCTGCGGTGCCCAATGA‑‑GCGCTTCC‑GGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGG                                                              >  7:119052/1‑149                                                                                                                GGCAGACGGCCTGTTGGCGGTAGCCTACTCGGCGTCTGCCG‑ACTCCATGATCTCCCGCCCAGGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGGTAGCCGTCGATGCAG                                               >  5:260416/1‑139                                                                                                                GGCAGACGGCCTGTTGGCGGTAGCCTACTCGGCGTCTGCCG‑ACTCCATGATCTCCCGCCCAGGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGGTAGCCGTCGATGCAG                                               <  6:260416/139‑1                                                                                                                 GCAGACGGCCTGTTGGCGGTAGCCTACTCGGCGTCTGCCG‑ACTCCATGATCTCCCGCCCAGGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGGTAGCCGTCGATGCAGGCATCGTCAGT                                    >  5:148114/1‑149                                                                                                                                                CGTCTGCCG‑ACTCCATGATCTCCCGCCCAGGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGGTAGCCGTCGATGCAGGCATCGTCAGTGGCCATTAGCACATGCGAGGTGTAGCGGGCA     <  4:204881/149‑1                                                                                                                                                   CTGCCG‑ACTCCATGATCTCCCGCCCAGGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGGTAGCCGTCGATGCAGGCATCGTCAGTGGCCATTAGCACATGCGAGGTGTAGCGGGCACTG  >  2:229340/1‑149                                                                                                                                                                                                                                                                                                          CACTGACGATGCCTGCATCGACGGCTACCGCCAGCTTGCCGAGGCCTGCCATGCGCACGGCACCGTGGTGCTGTCGCAACTGTTTCACCCTGGGCGGGAGATCATGGAGTCGGCAGACGGCCTGTTGGCGGTAGCCTACTCGGCGTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3271854‑3271705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtctgcCG‑ACTCCATGATCTCCCGCCCAGGGTGAAACAGTTGCGACAGCACCACGGTGCCGTGCGCATGGCAGGCCTCGGCAAGCTGGCGGTAGCCGTCGATGCAGGCATCGTCAGTGGCCATTAGCACATGCGAGGTGTAGCGGGCACTG  >  NC_002947/3271743‑3271887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.