New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3310078	31 (0.600)	4 (0.080)	4/244	NT	11.7%	coding (1193/1251 nt)	lhgO	L‑2‑hydroxyglutarate oxidase
	?	NC_002947	= 3310098	32 (0.670)					coding (1213/1251 nt)	lhgO	L‑2‑hydroxyglutarate oxidase

GTGTCGCGCGACGGCAAGCTGATCGACGATTTCCTGTTCGTCAACACCGCACGCAGTGTCAACGTGTGCAACGCACCGTCGCCAGCTGCTACCTCGGCCATCCCGATCGGCGCCTACATCGTCGAGAAGGTGTGCGAGCAGGTCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3309930‑3310078 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcggcctTGGGGAAGCTGCCGCCCTGCAGGCCGACCTGCTCGCACACCTTCTCGACGATGTAGGCGCCGATCGGGATGGCCGAGGTAGCAGCTGGCGACGGTGCGTTGCACACGTTGACACTGCGTGCGGTGTTGACGAACAGGAAAT  <  NC_002947/3310098‑3309958                                                                                                                                                                                                                                                                                                    GTGTCGCGCGACGGCAAGCTGATCGACGATTTCCTGTTCGTCAACACCGCACGCAGTGTCAACGTGTGCAACGCACCGTCGCCAGCTGCTACCTCGGCCATCCCGATCGGCGCCTACATCGTCGAGAAGGTGTGCGAGCAGGTCGGCCT                                                                                                                                               >  6:115822/1‑149                                           AACACCGCACGCAGTGTCAACGTGTGCAACGCACCGTCGCCAGCTGCTACCTCGGCCATCCCGATCGGCGCCTACATCGTCGAGAAGGTGTGCGAGCAGGTCGGCCTTGGGGAAGCTGCCGCCCTGCAGGCCGAC                                                                                                                   >  5:245662/1‑135                                           AACACCGCACGCAGTGTCAACGTGTGCAACGCACCGTCGCCAGCTGCTACCTCGGCCATCCCGATCGGCGCCTACATCGTCGAGAAGGTGTGCGAGCAGGTCGGCCTTGGGGAAGCTGCCGCCCTGCAGGCCGAC                                                                                                                   <  6:245662/135‑1                                                         TGTCAACGTGTGCAACGCACCGTCGCCAGCTGCTACCTCGGCCATCCCGATCGGCGCCTACATCGTCGAGAAGGTGTGCGAGCAGGTCGGCCTTGGGGAAGCTGCCGCCCTGCAGGCCGACCTGCTC                                                                                                             <  1:190781/127‑1                                                         TGTCAACGTGTGCAACGCACCGTCGCCAGCTGCTACCTCGGCCATCCCGATCGGCGCCTACATCGTCGAGAAGGTGTGCGAGCAGGTCGGCCTTGGGGAAGCTGCCGCCCTGCAGGCCGACCTGCTC                                                                                                             >  2:190781/1‑127                                                                                                                                              GTCGGCCTTGGGGAAGCTGCCGCCCTGCAGGCCGACCTGCTCGCACACCTTCTCGACGATGTAGGCGCCGATCGGGATGGCCGAGGTAGCAGCTGGCGACGGTGCGTTGCACACGTTGACACTGCGTGCGGTGTTGACGAACAGGAAAT  >  2:25869/1‑149                                                                                                                                              GTCGGCCTTGGGGAAGCTGCCGCCCTGCAGGCCGACCTGCTCGCACACCTTCTCGACGATGTAGGCGCCGATCGGGATGGCCGAGGTAGCAGCTGGCGACGGTGCGTTGCACACGTTGACACTGCGTGCGGTGTTGACGAACAGGAAAT  >  6:120158/1‑149                                                                                                                                                                                                                                                                                                    GTGTCGCGCGACGGCAAGCTGATCGACGATTTCCTGTTCGTCAACACCGCACGCAGTGTCAACGTGTGCAACGCACCGTCGCCAGCTGCTACCTCGGCCATCCCGATCGGCGCCTACATCGTCGAGAAGGTGTGCGAGCAGGTCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3309930‑3310078 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcggcctTGGGGAAGCTGCCGCCCTGCAGGCCGACCTGCTCGCACACCTTCTCGACGATGTAGGCGCCGATCGGGATGGCCGAGGTAGCAGCTGGCGACGGTGCGTTGCACACGTTGACACTGCGTGCGGTGTTGACGAACAGGAAAT  <  NC_002947/3310098‑3309958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.