| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3485232 | 33 (0.630) | 3 (0.060) | 3/256 | NT | 7.8% | coding (692/3804 nt) | PP_3091 | membrane protein |
| ? | NC_002947 | = 3485268 | 39 (0.780) | coding (656/3804 nt) | PP_3091 | membrane protein | |||||
CCAAAGGTCATGCCCAGCGGCTGCTGGCGTTCGTGCAGGTCGAGGCCGTCGAAAGCCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3485082‑3485232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaACAGCGATGAGCGCAATGCCCTGGCTGCCCAGCTGGTGGCCCGGGTGGAAGAATACGCCGAATGCCTCGATGCCAACCCGCCGGTTTACCTGATGCTGAGCAAGACCGACCAGTTGCCGGGCTTCAGCCAGGCTTTCGACGGCCTCGA < NC_002947/3485268‑3485121 CCAAAGGTCATGCCCAGCGGCTGCTGGCGTTCGTGCAGGTCGAGGCCGTCGAAAGCCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGC > 1:320185/1‑149CCAAAGGTCATGCCCAGCGGCTGCTGGCGTTCGTGCAGGTCGAGGCCGTCGAAAGCCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGC > 2:152321/1‑149CCAAAGGTCATGCCCAGCGGCTGCTGGCGTTCGTGCAGGTCGAGGCCGTCGAAAGCCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGC < 4:268097/149‑1 AAAGGTCATGCCCAGCGGCTGCTGGCGTTCGTGCAGGTCGAGGCCGTCGAAAGCCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGCCA > 4:298702/1‑149 CGTCGAAAGCCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGCCAACAGCGATGAGCGCAATGCCCTGGCTGCCCAGCTGGTGGCCCGG < 2:320185/149‑1 CCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGCCAACAGCGATGAGCGCAATGCCCTGGCTGCCCAGCTGGTGGCCCGGG < 7:191046/141‑1 CCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGCCAACAGCGATGAGCGCAATGCCCTGGCTGCCCAGCTGGTGGCCCGGG > 8:191046/1‑141 GCCAACAGCGATGAGCGCAATGCCCTGGCTGCCCAGCTGGTGGCCCGGGTGGAAGAATACGCCGAATGCCTCGATGCCAACCCGCCGGTTTACCTGATGCTGAGCAAGACCGACCAGTTGCCGGGCTTCAGCCAGGCTTTCGACGGCCT < 8:301853/149‑1 AACAGCGATGAGCGCAATGCCCTGGCTGCCCAGCTGGTGGCCCGGGTGGAAGAATACGCCGAATGCCTCGATGCCAACCCGCCGGTTTACCTGATGCTGAGCAAGACCGACCAGTTGCCGGGCTTCAGCCAGGCTTTCGACGGCCTCGA > 3:298702/1‑149 CCAAAGGTCATGCCCAGCGGCTGCTGGCGTTCGTGCAGGTCGAGGCCGTCGAAAGCCTGGCTGAAGCCCGGCAACTGGTCGGTCTTGCTCAGCATCAGGTAAACCGGCGGGTTGGCATCGAGGCATTCGGCGTATTCTTCCACCCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3485082‑3485232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaACAGCGATGAGCGCAATGCCCTGGCTGCCCAGCTGGTGGCCCGGGTGGAAGAATACGCCGAATGCCTCGATGCCAACCCGCCGGTTTACCTGATGCTGAGCAAGACCGACCAGTTGCCGGGCTTCAGCCAGGCTTTCGACGGCCTCGA < NC_002947/3485268‑3485121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |