| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3608344 | 34 (0.650) | 3 (0.060) | 3/252 | NT | 8.0% | coding (773/2265 nt) | PP_3182 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 3608370 | 37 (0.750) | coding (747/2265 nt) | PP_3182 | GGDEF domain‑containing protein | |||||
CAGCGCGTCGAACGCCTCCTGGCGCTTGCGCAGCAGGCGCAAGGTCCATAGCAGGCTGGCCAGGATCATCAGGGTCATGCTCAGGTTCAACCAGAACTGCCGGGAATAGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3608229‑3608344‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgCCAGGCAGAAATCCTCGCACCCTCGACGCTGGCCTATTCCCGGCAGTTCTGGTTGAACCTGAGCATGACCCTGATGATCCTGGCCAGCCTGCTATGGACCTTGCGCCTGCTGCGCAAGCGCCAGGAGGCGTTCGACGCGCTGGAAC < NC_002947/3608370‑3608225 CAGCGCGTCGAACGCCTCCTGGCGCTTGCGCAGCAGGCGCAAGGTCCATAGCAGGCTGGCCAGGATCATCAGGGTCATGCTCAGGTTCAACCAGAACTGCCGGGAATAGGCCAGCGCCAGGCAGAAATCCTCGCACCCTCGACGCTGGC < 6:287851/149‑1 AACGCCTCCTGGCGCTTGCGCAGCAGGCGCAAGGTCCATAGCAGGCTGGCCAGGATCATCAGGGTCATGCTCAGGTTCAACCAGAACTGCCGGGAATAGGCCAGCGCCAGGCAGAAATCCTCGCACCCTCGACGCTGG < 7:23276/138‑1 AACGCCTCCTGGCGCTTGCGCAGCAGGCGCAAGGTCCATAGCAGGCTGGCCAGGATCATCAGGGTCATGCTCAGGTTCAACCAGAACTGCCGGGAATAGGCCAGCGCCAGGCAGAAATCCTCGCACCCTCGACGCTGG > 8:23276/1‑138 GCCAGCGCCAGGCAGAAATCCTCGCACCCTCGACGCTGGCCTATTCCCGGCAGTTCTGGTTGAACCTGAGCATGACCCTGATGATCCTGGCCAGCCTGCTATGGACCTTGCGCCTGCTGCGCAAGCGCCAGGAGGCGTTCGACGCGCTG < 4:60497/149‑1 AGCGCCAGGCAGAAATCCTCGCACCCTCGACGCTGGCCTATTCCCGGCAGTTCTGGTTGAACCTGAGCATGACCCTGATGATCCTGGCCAGCCTGCTATGGACCTTGCGCCTGCTGCGCAAGCGCCAGGAGGCGTTCGACGCGCTGGAA < 2:26677/149‑1 CGCCAGGCAGAAATCCTCGCACCCTCGACGCTGGCCTATTCCCGGCAGTTCTGCTTGAACCTGAGCATGACCCTGATGATCCTGGCCAGCCTGCTATGGACCTTGCGCCTGCTGCGCAAGCGCCAGGAGGCGTTCGACGCGCTGGAAC > 2:316732/1‑148 CAGCGCGTCGAACGCCTCCTGGCGCTTGCGCAGCAGGCGCAAGGTCCATAGCAGGCTGGCCAGGATCATCAGGGTCATGCTCAGGTTCAACCAGAACTGCCGGGAATAGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3608229‑3608344‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgCCAGGCAGAAATCCTCGCACCCTCGACGCTGGCCTATTCCCGGCAGTTCTGGTTGAACCTGAGCATGACCCTGATGATCCTGGCCAGCCTGCTATGGACCTTGCGCCTGCTGCGCAAGCGCCAGGAGGCGTTCGACGCGCTGGAAC < NC_002947/3608370‑3608225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |