New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3711580	37 (0.710)	3 (0.060)	3/246	NT	8.0%	coding (111/759 nt)	paaC	ring 1,2‑phenylacetyl‑CoA epoxidase subunit beta
	?	NC_002947	= 3711623	35 (0.730)					coding (68/759 nt)	paaC	ring 1,2‑phenylacetyl‑CoA epoxidase subunit beta

GGTTGCTCGACCAGCAGCAGGTTGCGGTAGGCGCGCTCGTCACGGCGGAACGCCAGGGCATCGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3711425‑3711580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggccagcGCCTCTGCGAATGGTGTGGCCGTGCCCCGGCCATCGAGGAAGAGCTGGCCCTGATGAACGTCGGCCTCGATCTGGTCGGCCAGGCCCGCAACTGGCTGGAGTATGCCGCCGAGCTGCTCGACGATGGCCGAGATGCCGAT  <  NC_002947/3711623‑3711484                                                                                                                                                                                                                                                                                                          GGTTGCTCGACCAGCAGCAGGTTGCGGTAGGCGCGCTCGTCACGGCGGAACGCCAGGGCATCGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCA                                                                                                                                                      <  1:58077/148‑1  GTTGCTCGACCAGCAGCAGGTTGCGGTAGGCGCGCTCGTCACGGCGGAACGCCAGGGCATCGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGG                                                                                                                                                    <  8:64856/149‑1  GTTGCTCGACCAGCAGCAGGTTGCGGTAGGCGCGCTCGTCACGGCGGAACGCCAGGGCATCGGCATCTCGGCCATCGTCCAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAG                                                                                                                                                     >  8:242862/1‑148         GACCAGCAGCAGGTTGCGGTAGGCGCGCTCGTCACGGCGGAACGCCAGGGCATCGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAG                                                                                                                                               <  8:225479/147‑1                                                          GCATCGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCGCCTCTGCGAATGGTGTGGCCGTGCCCCGGCCATCGAGGAAGAGCTGGCC                                                                                            <  3:50539/149‑1                                                                                 GAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCGCCTCTGCGAATGGTGTGGCCGTGCCCCGGCCATCGAGGAAGAGCTGGCCCTGA                                                                                        <  1:51594/130‑1                                                                                 GAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGCGCCTCTGCGAATGGTGTGGCCGTGCCCCGGCCATCGAGGAAGAGCTGGCCCTGA                                                                                        >  2:51594/1‑130                                                                                                                                                    AGGGCCAGCGCCTCTGCGAATGGTGTGGCCGTGCCCCGGCCATCGAGGAAGAGCTGGCCCTGATGAACGTCGGCCTCGATCTGGTCGGCCAGGCCCGCAACTGGCTGGAGTATGCCGCCGAGCTGCTCGACGATGGCCGAGATGCCGAT  <  6:186574/149‑1                                                                                                                                                                                                                                                                                                          GGTTGCTCGACCAGCAGCAGGTTGCGGTAGGCGCGCTCGTCACGGCGGAACGCCAGGGCATCGGCATCTCGGCCATCGTCGAGCAGCTCGGCGGCATACTCCAGCCAGTTGCGGGCCTGGCCGACCAGATCGAGGCCGACGTTCATCAGGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3711425‑3711580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggccagcGCCTCTGCGAATGGTGTGGCCGTGCCCCGGCCATCGAGGAAGAGCTGGCCCTGATGAACGTCGGCCTCGATCTGGTCGGCCAGGCCCGCAACTGGCTGGAGTATGCCGCCGAGCTGCTCGACGATGGCCGAGATGCCGAT  <  NC_002947/3711623‑3711484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.