| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3822271 = | 39 (0.750) | 4 (0.080) | 3/252 | NT | 8.9% | coding (913/1293 nt) | kguT | 2‑ketogluconate transporter, putative |
| ? | NC_002947 | 3822350 = | 45 (0.910) | coding (834/1293 nt) | kguT | 2‑ketogluconate transporter, putative | |||||
CCGTCGATCCTCAAGCAGGCGGCGAACGTCGATATCGTGCAGGCCGGCTGGCTGGCCTCGGTGCCTTACCTGGCGGCGGTGCTGGCAATGGTGGGCGTGTCCTGGGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3822421‑3822271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTGCGGCGAGC > NC_002947/3822350‑3822498 CCGTCGATCCTCAAGCAGGCGGCGAACGTCGATATCGTGCAGGCCGGCTGGCTGGCCTCGGTGCCTTACCTGGCGGCGGTGCTGGCAATGGTGGGCGTGTCCTGGGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCC > 5:91996/1‑149 GTCGATCCTCAAGCAGGCGGCGAACGTCGATATCGTGCAGGCCGGCTGGCTGGCCTCGGTGCCTTACCTGGCGGCGGTGCTGGCAATGGTGGGCGTGTCCTGGGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCCGC > 8:126005/1‑149 GTCGATCCTCAAGCAGGCGGCGAACGTCGATATCGTGCAGGCCGGCTGGCTGGCCTCGGTGCCTTACCTGGCGGCGGTGCTGGCAATGGTGGGCGTGTCCTGGGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCCGC > 8:286434/1‑149 CCTGGCGGCGGTGCTGGCAATGGTGGGCGTGTCCTGGGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGAT > 2:52113/1‑149 ctGCGGTGCTGGCAATTGTGGGCGTGTCCTGTGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTTGCCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCTCCTCCTGCTTGAGGATCTACG > 2:140872/3‑149 CGGTGCTGGCAATGGTTGGCGTGTCCTGTGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCTCCGCCTGCTTGAGGATCGACTGCA < 1:140872/149‑1 GCAATGGTGGGCGTGTCCTGGGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACA < 1:52113/147‑1 CGCCGCCAGTGAAGGCACCGAGGCCAGCCCGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTGCG < 8:302601/149‑1 GCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTGCGG > 8:21300/1‑149 CCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACATGCCGATGCTCCAGCAGAAGTACTGCAGCG‑CAGGATGATCACTTGCGGCGAGC < 8:64927/149‑1 CCGTCGATCCTCAAGCAGGCGGCGAACGTCGATATCGTGCAGGCCGGCTGGCTGGCCTCGGTGCCTTACCTGGCGGCGGTGCTGGCAATGGTGGGCGTGTCCTGGGCGTCCGACCGCCTGCAAAAGCGCAAGCGCTTCGTCTGGCCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3822421‑3822271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgcCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTGCGGCGAGC > NC_002947/3822350‑3822498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |