New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3822271 =	39 (0.750)	4 (0.080)	3/252	NT	8.9%	coding (913/1293 nt)	kguT	2‑ketogluconate transporter, putative
	?	NC_002947	3822350 =	45 (0.910)					coding (834/1293 nt)	kguT	2‑ketogluconate transporter, putative

ACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTGCGGCGAGC  >  NC_002947/3822205‑3822498                                                                                                                                                  |                                                                                                                                                      atcctcaagcaggcggcgaacgtcgatatcgtgcaggccggctggctggcctcggtgccttacctgGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAgg                                                                                                                                                    >  2:52113‑M1/67‑149 (MQ=255)         cAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCAc                                                                                                                                            <  2:300547/149‑1 (MQ=255)          aGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCAcc                                                                                                                                           >  2:194391/1‑149 (MQ=255)             aaTACTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAg                                                                                                                                        <  5:177727/149‑1 (MQ=255)                 cTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTAGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGCTAAGTCACCGAGgcc‑a                                                                                                                                   >  6:147971/1‑149 (MQ=255)                   cGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGgcc‑agc                                                                                                                                 >  4:85241/1‑149 (MQ=255)                    gCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGc                                                                                                                                              <  1:43411/136‑1 (MQ=255)                    gCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGc                                                                                                                                              >  2:43411/1‑136 (MQ=255)                       gCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCc‑agccagc                                                                                                                             >  2:62951/1‑149 (MQ=255)                         ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑agccagcc                                                                                                                            <  7:157070/148‑1 (MQ=255)                         ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑agccagcc                                                                                                                            >  8:157070/1‑148 (MQ=255)                         ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCg                                                                                                                           <  6:285945/149‑1 (MQ=255)                         ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCg                                                                                                                           >  3:250897/1‑149 (MQ=255)                          cAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCgg                                                                                                                          >  7:126005/1‑149 (MQ=255)                          cAAGGCGTAGGAACCATAGAACGCCAACGAGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCgg                                                                                                                          >  7:225431/1‑149 (MQ=255)                           aaGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGc                                                                                                                         <  3:85241/149‑1 (MQ=255)                               cGTAGGAACCATAGAACGCCAACGCGGCAATCAGAAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGGC‑AGCCAGCCGGCCTGc                                                                                                                     <  5:147971/149‑1 (MQ=255)                                          tAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGAc                                                                                                          <  6:210914/149‑1 (MQ=255)                                                      gcgGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTg                                                                                              >  2:311375/1‑149 (MQ=255)                                                           aaTCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGa                                                                                         <  8:225431/149‑1 (MQ=255)                                                           aaTCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGa                                                                                         <  4:250897/149‑1 (MQ=255)                                                           aaTCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGa                                                                                         <  1:311375/149‑1 (MQ=255)                                                               cctggcggcggtgctggcaatggtgggcgtgtcctgggcgtccgaccgcctgcaaaagcgcaagcgcttcgtctggccgccgcCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGAt                                                                                     >  2:52113‑M2/84‑149 (MQ=255)                                                                   GCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGAc                                                                                 >  8:286434‑M1/1‑149 (MQ=255)                                                                   GCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGAc                                                                                 >  8:126005‑M1/1‑149 (MQ=255)                                                                    ctgcggtgctggcaattgtgggcgtgtcctgtgcgtccgaccgcctgcaaaagcgcaagcgcttcgtcttgccgccgcCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCTCCTCCTGCTTGAGGATCTACg                                                                                >  2:140872‑M2/79‑149 (MQ=255)                                                                     GGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACgg                                                                               >  5:91996‑M1/1‑149 (MQ=255)                                                                       cggtgctggcaatggttggcgtgtcctgtgcgtccgaccgcctgcaaaagcgcaagcgcttcgtctggccgccgcCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCTCCGCCTGCTTGAGGATCGACTGCa                                                                             <  1:140872‑M2/74‑1 (MQ=255)                                                                             gACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCcaca                                                                       <  1:194391/149‑1 (MQ=255)                                                                              aCGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAg                                                                      >  7:64927/1‑149 (MQ=255)                                                                               gcaatggtgggcgtgtcctgggcgtccgaccgcctgcaaaagcgcaagcgcttcgtctggccgccgcCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCcaca                                                                       <  1:52113‑M2/80‑1 (MQ=255)                                                                                     gcttgcgcttTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAg                                                               <  4:259092/149‑1 (MQ=255)                                                                                     gcttgcgcttTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAg                                                               >  7:158269/1‑149 (MQ=255)                                                                                        tgcgcttTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGGGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCa                                                            >  3:122851/1‑149 (MQ=255)                                                                                           gcttTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATa                                                          >  1:298928/1‑148 (MQ=255)                                                                                             ttttGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATacac                                                       >  2:76042/1‑149 (MQ=255)                                                                                                 gCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCca                                                                         >  1:29094/1‑127 (MQ=255)                                                                                                 gCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCca                                                                         <  2:29094/127‑1 (MQ=255)                                                                                                   aGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGAt                                                 >  2:108132/1‑149 (MQ=255)                                                                                                       ggTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTc                                             <  1:76042/149‑1 (MQ=255)                                                                                                          cGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCcag                                          >  6:295762/1‑149 (MQ=255)                                                                                                           ggACGCCCAGGACACGCCCACCATTGCCAGCACCTCCGCCATGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACTATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGGCACAGCACGAAGCCATACACGCCGATGCTCcagc                                         <  1:62951/149‑1 (MQ=255)                                                                                                               gCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGaa                                     <  1:108132/149‑1 (MQ=255)                                                                                                                  cacgACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACCTACGCCGCCTGCATGAGGATCGACGGCAGACACACCACGAAGCCATACACGCCGATGCTCCAGCAGAAGt                                   >  2:67567/4‑148 (MQ=255)                                                                                                                  cAGGACACGCCCACCATTGCCAGCACAGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGt                                   >  3:276549/1‑148 (MQ=255)                                                                                                                   aGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTAc                                 >  8:97337/1‑149 (MQ=255)                                                                                                                     gACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTg                               <  1:1400/149‑1 (MQ=255)                                                                                                                       cacGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCGAGCCACCCGGCCTGCACGATATCGACGTACGCCGCCTGCTTGAGGATCGCCGGCACCCCCACCCCGAACCCATACACGCCCATCCTCCAGCACAAGTACTg                               >  1:236106/1‑148 (MQ=255)                                                                                                                        acGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGGGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAg                            <  4:122851/149‑1 (MQ=255)                                                                                                                          gCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGACGCCATACACGCCGATGCTCCAGCAGAAGTACTg                               <  5:73847/144‑1 (MQ=255)                                                                                                                          gCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTg                               >  6:73847/1‑144 (MQ=255)                                                                                                                          gCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGGACTGCAgcg                          >  7:302601/1‑149 (MQ=255)                                                                                                                             caccaTTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCa                       <  2:298928/149‑1 (MQ=255)                                                                                                                                      cAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCa              >  7:94737/1‑149 (MQ=255)                                                                                                                                      cAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCa              >  6:14765/1‑149 (MQ=255)                                                                                                                                            cgccgcCAGTGAAGGCACCGAGGCC‑AGCCCGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTgcg        <  8:302601‑M2/143‑1 (MQ=255)                                                                                                                                             gccgcCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTgcgg       >  8:21300‑M2/6‑149 (MQ=255)                                                                                                                                                 cCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACATGCCGATGCTCCAGCAGAAGTACTGCAGCG‑CAGGATGATCACTTGCGGCGAGc  <  8:64927‑M2/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      ACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCC‑AGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGACGGCAGCCACAGCACGAAGCCATACACGCCGATGCTCCAGCAGAAGTACTGCAGCGCCAGGATGATCACTTGCGGCGAGC  >  NC_002947/3822205‑3822498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.