New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3822271 =	39 (0.750)	4 (0.080)	3/252	NT	8.9%	coding (913/1293 nt)	kguT	2‑ketogluconate transporter, putative
	?	NC_002947	3822350 =	45 (0.910)					coding (834/1293 nt)	kguT	2‑ketogluconate transporter, putative

GCCGGCAGGATCTCGGGCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGAC  >  NC_002947/3822123‑3822419                                                                                                                                                     |                                                                                                                                                     gctcgccgcaagtgatcatcctgcgctgcagtacttctgctggagcatcggcatgtatggcttcgtgctgtggctgccgtcgatcctcaagcaggcggcgaacgtcgatatcgtgcaggccggctggctggcctcggtgccttacctgg                                                                                                                                                      <  8:64927‑M1/1‑1 (MQ=255)    ggCAGGATCTCGGGCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATACTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAgcgg                                                                                                                                                   >  6:177727/1‑149 (MQ=255)     gCAGGATCTCGGGCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAgcggc                                                                                                                                                  <  5:282745/149‑1 (MQ=255)     ccgcaagtgatcatcctggcgctgcagtacttctgctggagcatcggcgtgtatggcttcgtgctgtggctgccgtcgatcctcaagcaggcggcgaacgtcgatatcgtgcaggccggctggctggcctcggtgccttacctggcggc                                                                                                                                                  >  8:21300‑M1/145‑149 (MQ=255)      cgcaagtgatcatcctggcgctgcagtacttctgctggagcatcggcgtgtatggcttcgtgctgtggctgccgtcgatcctcaagcaggcggcgaacgtcgatatcgtgcaggccggcgggctggcctcggtgccttcactggcggcg                                                                                                                                                 <  8:302601‑M1/6‑1 (MQ=255)         gATCTCGGGCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGTCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGACAACGCGGCAATCAGCAGCggcggc                                                                                                                                               >  7:126704/1‑148 (MQ=255)           tctcGGGCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCCACGCGGCAATCCGCAGCGGCGGCCAg                                                                                                                                            >  7:286434/1‑149 (MQ=255)               gggCACGATCGCGAAGAACGGGCCATTAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACg                                                                                                                                         >  1:8345/1‑148 (MQ=255)               gggCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGGCGCGGCGGCGAGAc                                                                                                                                          >  8:223866/1‑147 (MQ=255)                ggCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGaa                                                                                                                                       <  2:211691/149‑1 (MQ=255)                      aTCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAgcgctt                                                                                                                                 <  1:34038/149‑1 (MQ=255)                       tCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAgcgcttg                                                                                                                                <  3:249371/149‑1 (MQ=255)                       tCGCGAAGAACGGGACATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCGAAGGCGTAGGAACAATAGAACGCAAAAGCGGCAATCAGCAGCGTCGGCCAGACGAAgcgcttc                                                                                                                                >  6:91996/1‑148 (MQ=255)                                aCGGGGCATTAGGGGCGTACATGCAGGCACCAGCGACCAACAGCAATGCATACGACAGCAAGAAATTCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCTGCGGCCAGAAGAAGCGCTTGAGCTTTTg                                                                                                                        <  8:126704/148‑1 (MQ=255)                                aCGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGc                                                                                                                       <  1:204639/149‑1 (MQ=255)                                    gCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGc                                                                                                                   <  7:223866/149‑1 (MQ=255)                                                 tACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCa                                                                                                      <  3:282818/149‑1 (MQ=255)                                                           cACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGcc                                                                                             >  3:259092/1‑148 (MQ=255)                                                            aCCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCcca                                                                                           >  5:210914/1‑149 (MQ=255)                                                                     tgtggctgccgtcgatcctcaagcaggcggcgaacgtcgatatcgtgcaggccggctggctggcctcggtgccttacctgGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGc                                                                                    <  1:52113‑M1/67‑1 (MQ=255)                                                                     caccaGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGc                                                                                    >  1:300547/1‑147 (MQ=255)                                                                      accaGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCccac                                                                                          >  6:129247/1‑140 (MQ=255)                                                                      accaGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCccac                                                                                          <  5:129247/140‑1 (MQ=255)                                                                       ccaGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAg                                                                                 >  2:1400/1‑148 (MQ=255)                                                                           tgcagtcgatcctcaagcaggcggagaacgtcgatatcgtgcaggccggctggctggcctcggtgccttacctgGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCACAGGACACGCCAACCATTGCCAGCAccg                                                                            <  1:140872‑M1/75‑1 (MQ=255)                                                                              cgtagatcctcaagcaggaggagaacgtcgatatcgtgcaggccggctggctggcctcggtgccttacctgGCGGCGGCAAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCACAGGACACGCCCACAATTGCCAGcaccgcag                                                                         >  2:140872‑M1/72‑147 (MQ=255)                                                                                   atcctcaagcaggcggcgaacgtcgatatcgtgcaggccggctggctggcctcggtgccttacctgGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAgg                                                                    >  2:52113‑M1/67‑149 (MQ=255)                                                                                           cAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCAc                                                            <  2:300547/149‑1 (MQ=255)                                                                                            aGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCAcc                                                           >  2:194391/1‑149 (MQ=255)                                                                                               aaTACTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAg                                                        <  5:177727/149‑1 (MQ=255)                                                                                                   cTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTAGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGCTAAGTCACCGAGgcca                                                    >  6:147971/1‑149 (MQ=255)                                                                                                     cGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGgccagc                                                  >  4:85241/1‑149 (MQ=255)                                                                                                      gCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGc                                                              <  1:43411/136‑1 (MQ=255)                                                                                                      gCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGc                                                              >  2:43411/1‑136 (MQ=255)                                                                                                         gCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCcagccagc                                              >  2:62951/1‑149 (MQ=255)                                                                                                           ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCagccagcc                                             <  7:157070/148‑1 (MQ=255)                                                                                                           ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCagccagcc                                             >  8:157070/1‑148 (MQ=255)                                                                                                           ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCg                                            <  6:285945/149‑1 (MQ=255)                                                                                                           ccAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCg                                            >  3:250897/1‑149 (MQ=255)                                                                                                            cAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCgg                                           >  7:126005/1‑149 (MQ=255)                                                                                                            cAAGGCGTAGGAACCATAGAACGCCAACGAGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCgg                                           >  7:225431/1‑149 (MQ=255)                                                                                                             aaGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGc                                          <  3:85241/149‑1 (MQ=255)                                                                                                                 cGTAGGAACCATAGAACGCCAACGCGGCAATCAGAAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGGCAGCCAGCCGGCCTGc                                      <  5:147971/149‑1 (MQ=255)                                                                                                                            tAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGAc                           <  6:210914/149‑1 (MQ=255)                                                                                                                                        gcgGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTg               >  2:311375/1‑149 (MQ=255)                                                                                                                                             aaTCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGa          <  4:250897/149‑1 (MQ=255)                                                                                                                                             aaTCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGa          <  1:311375/149‑1 (MQ=255)                                                                                                                                             aaTCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGa          <  8:225431/149‑1 (MQ=255)                                                                                                                                                     GCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGAc  >  8:126005‑M1/1‑149 (MQ=255)                                                                                                                                                     GCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGAc  >  8:286434‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCCGGCAGGATCTCGGGCACGATCGCGAAGAACGGGCCATAAGGGGCGTACATGCAGGCACCAGCGACCACCAGCAATGCATACGACAGCCAGAAATGCTCGCTGCCCAAGGCGTAGGAACCATAGAACGCCAACGCGGCAATCAGCAGCGGCGGCCAGACGAAGCGCTTGCGCTTTTGCAGGCGGTCGGACGCCCAGGACACGCCCACCATTGCCAGCACCGCCGCCAGGTAAGGCACCGAGGCCAGCCAGCCGGCCTGCACGATATCGACGTTCGCCGCCTGCTTGAGGATCGAC  >  NC_002947/3822123‑3822419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.