New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3825683	27 (0.520)	4 (0.080)	4/256	NT	12.5%	coding (363/1020 nt)	ptxS	2‑ketogluconate utilization repressor
	?	NC_002947	= 3825702	30 (0.600)					coding (344/1020 nt)	ptxS	2‑ketogluconate utilization repressor

GCATTGTCCAGGCCGACAAGGTCCACATTCAGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3825534‑3825683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggAGCGTCACCACCTGGTGGCCCTGCAGAGCTACAACGTCGAAGGGCTGATCGTGAACACGCTCGGCCACCACCCCGGCGAGCTGCTCAACCTGCAGCGTGACATCCCCATGGTGCTGGTCGACCGCCAATTGCCCGAGCTGAATGTGGA  <  NC_002947/3825702‑3825555                                                                                                                                                                                                                                                                                                            GCATTGTCCAGGCCGACAAGGTCCACATTCAGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAG                                                                                                                                                       <  7:102375/149‑1       TCCAGGCCGACAAGGTCCACATTCAGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGAGCGT                                                                                                                                                 >  1:136216/1‑149                               AGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGAGCGTCACCACCTGGTGGCCCTGCAGAG                                                                                                                          <  2:136216/148‑1                                 CTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGAGCGTCACCACCTGGTGGCCCTGCAGAGCTA                                                                                                                       <  2:156866/149‑1                                                                            TGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGAGCGTCACCACCTGGTGGCCCTGCAGA                                                                                                                           <  5:308196/102‑1                                                                            TGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGAGCGTCACCACCTGGTGGCCCTGCAGA                                                                                                                           >  6:308196/1‑102                                                                                                                                                      GAGCGTCACCACCTGGTGGCCCTGCAGAGCTACAACGTCGAAGGGCAGATCGTGAACACGCTCGGCCACCACCCCGGCGAGCTGCTCAACCTGCAGCGTGACATCCCCATGGTGCTGGTCGACCGCCAATTGCCCGAGCTGAATGTGGA  >  8:115958/1‑149                                                                                                                                                                                                                                                                                                            GCATTGTCCAGGCCGACAAGGTCCACATTCAGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3825534‑3825683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggAGCGTCACCACCTGGTGGCCCTGCAGAGCTACAACGTCGAAGGGCTGATCGTGAACACGCTCGGCCACCACCCCGGCGAGCTGCTCAACCTGCAGCGTGACATCCCCATGGTGCTGGTCGACCGCCAATTGCCCGAGCTGAATGTGGA  <  NC_002947/3825702‑3825555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.