New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3825683	27 (0.520)	4 (0.080)	4/256	NT	12.5%	coding (363/1020 nt)	ptxS	2‑ketogluconate utilization repressor
	?	NC_002947	= 3825702	30 (0.600)					coding (344/1020 nt)	ptxS	2‑ketogluconate utilization repressor

TCCACATTCAGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGATCAGTCGCGTCTGGCCGCGCTT  >  NC_002947/3825555‑3825850                                                                                                                                                    |                                                                                                                                                     tCCACATTCAGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCTGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTc                                                                                                                                                     >  8:115958‑M2/1‑148 (MQ=255)                                        aTGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCt                                                                                                              <  4:239064/149‑1 (MQ=255)                                          ggggATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGcaca                                                                                                                        >  6:13288/1‑137 (MQ=255)                                          ggggATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGcaca                                                                                                                        <  5:13288/137‑1 (MQ=255)                                                   aCGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCt                                                                                                   >  4:5772/1‑149 (MQ=255)                                                        gCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAAcc                                                                                                        <  1:174139/139‑1 (MQ=255)                                                        gCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAAcc                                                                                                        >  2:174139/1‑139 (MQ=255)                                                               gAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCg                                                                                        <  1:210825/148‑1 (MQ=255)                                                                  cagcTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTCTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGttt                                                                                    <  4:107804/149‑1 (MQ=255)                                                                     cTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCa                                                                                 >  1:40874/1‑149 (MQ=255)                                                                           ggggTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGt                                                                           <  2:101318/149‑1 (MQ=255)                                                                              cgaagggCTGATCGTGAACACGCTCGGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAg                                                                                           >  4:208827/6‑130 (MQ=255)                                                                              cgaagggCTGATCGTGAACACGCTCGGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAg                                                                                           <  3:208827/125‑1 (MQ=255)                                                                                    gCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACgg                                                                  >  1:83648/1‑149 (MQ=255)                                                                                     ccGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACAccacca                                                                                                                  >  1:126342/1‑100 (MQ=255)                                                                                     ccGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACAccacca                                                                                                                  <  2:126342/100‑1 (MQ=255)                                                                                      cGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGcc                                                                <  3:5772/149‑1 (MQ=255)                                                                                         gCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACt                                                             >  7:200035/1‑149 (MQ=255)                                                                                            tgtTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGaa                                                          <  7:257124/149‑1 (MQ=255)                                                                                              ttCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGaa                                                          >  4:130134/1‑147 (MQ=255)                                                                                               tCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAg                                                       >  8:304883/1‑149 (MQ=255)                                                                                                        gCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAgg                                              <  2:83648/149‑1 (MQ=255)                                                                                                           cTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCa                                                               <  4:47784/129‑1 (MQ=255)                                                                                                                  gTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGCTTGGAGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGATTCCACGCCGTGCATCACGGCCACTGAATAGGTGTTGAGGATATCGGcca                                    >  5:316585/1‑149 (MQ=255)                                                                                                                      tAGCTCTGCAGGGCCACCAGGTGGTGACGCTcctgcagagctacaacgtcgaagggctgatcgtgaacacgctcggccaccaccccggcgagctgctcaacctgcagcgtgacatccccatggtgctggtcgaccgccaattgcccgag                                <  2:156866‑M2/149‑119 (MQ=255)                                                                                                                         ctctGCAGGGCCACCAGGTGGTGACGCTcctgcagagctacaacgtcgaagggctgatcgtgaacacgctcggccaccaccccggcgagctgctcaacctgcagcgtgacatccccatggtgctggtcgaccgccaattgcccgagct                              <  2:136216‑M2/148‑121 (MQ=255)                                                                                                                          tctGCAGGGCCACCAGGTGGTGACGCTcctgcagagctacaacgtcgaagggctgatcgtgaacacgctcggccaccaccccggcgagctgctcaacctgca                                                                           <  5:308196‑M2/102‑76 (MQ=255)                                                                                                                          tctGCAGGGCCACCAGGTGGTGACGCTcctgcagagctacaacgtcgaagggctgatcgtgaacacgctcggccaccaccccggcgagctgctcaacctgca                                                                           >  6:308196‑M2/1‑27 (MQ=255)                                                                                                                            tGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGcc                          >  7:25602/1‑149 (MQ=255)                                                                                                                               aGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGAt                       >  1:274322/1‑149 (MQ=255)                                                                                                                                gggCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGAt                       >  3:24571/1‑148 (MQ=255)                                                                                                                                 ggCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGAt                       >  5:265866/1‑147 (MQ=255)                                                                                                                                       caGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGATCAGTcgcg               >  3:238559/1‑149 (MQ=255)                                                                                                                                        aGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGATCAGTCGCGt              <  4:24571/149‑1 (MQ=255)                                                                                                                                               gACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGATCAGTCGCGTCTGGCcg       >  5:91333/1‑149 (MQ=255)                                                                                                                                                aCGCTcctgcagagctacaacgtcgaagggctgatcgtgaacacgctcggccaccaccccggcgagctgctcaacctgcagcgtgacatccccatggtgctggtcgaccgccaattgcccgagctgaatgtggaccttgtcggcctgga      >  1:136216‑M2/1‑5 (MQ=255)                                                                                                                                                  gCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAgg                                              >  7:90225/1‑107 (MQ=255)                                                                                                                                                  gCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAgg                                              <  8:90225/107‑1 (MQ=255)                                                                                                                                                    tCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGTCTGTAACCATGCTGACGGCAGGAGGTTTCCACGCCGTGCATCACGGCCACTTAAAAGGGGATGAGGAAATCTGCCACCAGAATGACGAAAAGTCGCGTCTGGCCGCGCtt  >  8:5794/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     TCCACATTCAGCTCGGGCAATTGGCGGTCGACCAGCACCATGGGGATGTCACGCTGCAGGTTGAGCAGCTCGCCGGGGTGGTGGCCGAGCGTGTTCACGATCAGCCCTTCGACGTTGTAGCTCTGCAGGGCCACCAGGTGGTGACGCTCCTGCTCGTCGTCGCGGTTGGTGTTGCACACCACCAGGCTGTAACCATGCTGACGGCAGGCGGTTTCCACGCCGTGCATCACGGCCACTGAATAGGGGTTGAGGATATCGGCCACCAGCATGCCGATCAGTCGCGTCTGGCCGCGCTT  >  NC_002947/3825555‑3825850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.