New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3967182 =	46 (0.880)	3 (0.060)	3/258	NT	6.7%	coding (1375/2001 nt)	ydcP	peptidase
	?	NC_002947	3967224 =	39 (0.770)					coding (1417/2001 nt)	ydcP	peptidase

TCAGTGCCTCGATGGCTTCGCGGCGCAGGGCCTTGAGCTGCGAGTTGGGAATGAAGTACGCCTGTGGGGCATCCAGTTCGATACGGTCGGCGTGGTACAGGGTGGTGCCCAGCTGGCCGAGCAGGTCGTGCAACTGCTCCAGTGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3967332‑3967182 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgGGCACCACCCTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGCGCCGCGAAGCCATCGAGGCAC  >  NC_002947/3967224‑3967329                                                                                                                                                                                                                                                                   TCAGTGCCTCGATGGCTTCGCGGCGCAGGGCCTTGAGCTGCGAGTTGGGAATGAAGTACGCCTGTGGGGCATCCAGTTCGATACGGTCGGCGTGGTACAGGGTGGTGCCCAGCTGGCCGAGCAGGTCGTGCAACTGCTCCAGTGCCTGC                                                                                                              >  6:153051/1‑149                                                                                                             CCAGCTGGCCGAGCAGGTCGTGCAACTGCTCCAGTGCCTGCTGGGCACCACCCTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGCGCCGCGAAGCCATCGAGGCgc  >  5:283066/1‑147                                                                                                              CAGCTGGCCGAGCAGGTCGTGCAACTGCTCCAGTGCCTGCTGGGCACCACCCTGTACCACGCCGACCATATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGCGCCGCGAA               >  3:54175/1‑135                                                                                                              CAGCTGGCCGAGCAGGTCGTGCAACTGCTCCAGTGCCTGCTGGGCACCACCCTGTACCACGCCGACCATATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGCGCCGCGAA               <  4:54175/135‑1                                                                                                                                                                                                                                                                   TCAGTGCCTCGATGGCTTCGCGGCGCAGGGCCTTGAGCTGCGAGTTGGGAATGAAGTACGCCTGTGGGGCATCCAGTTCGATACGGTCGGCGTGGTACAGGGTGGTGCCCAGCTGGCCGAGCAGGTCGTGCAACTGCTCCAGTGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3967332‑3967182 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgGGCACCACCCTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGCGCCGCGAAGCCATCGAGGCAC  >  NC_002947/3967224‑3967329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.