New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4243965	39 (0.750)	4 (0.080)	4/254	NT	9.5%	coding (1056/1191 nt)	aruH	arginine‑‑pyruvate transaminase AruH
	?	NC_002947	= 4244002	39 (0.780)					coding (1019/1191 nt)	aruH	arginine‑‑pyruvate transaminase AruH

ATACGCTGGACGGTGTGCTCACGCATCCGTCTGCCCGCGCATCAGTTCGCCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4243812‑4243965 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGGCGAGGCATTCGGCCCTAGCGCTGCCGGGCATATCCGCCTGGGCCTGGTGCTGGGTAACGAGGCGCTGGTCGATGCCTGCCAGCGCATTGCCCGCTGCGCCGGCGAAC  <  NC_002947/4244002‑4243856                                                                                                                                                                                                                                                                                                               ATACGCTGGACGGTGTGCTCACGCATCCGTCTGCCCGCGCATCAGTTCGCCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCT                                                                                                                                                          <  6:13303/149‑1  TACGCTGGACGGTGTGCTCACGCATCCGTCTGCCCGCGCATCAGTTCGCCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTC                                                                                                                                                         <  7:271669/149‑1                     ACGCATCCGTCTGCCCGCGCATCAGTTCGCCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCG                                                                                                                                                     >  5:994/1‑134                     ACGCATCCGTCTGCCCGCGCATCAGTTCGCCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCG                                                                                                                                                     <  6:994/134‑1                                              TTCGCCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCGACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGG                                                                                                             >  8:105346/1‑149                                                  CCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCGACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGGCGAG                                                                                                         <  7:105346/149‑1                                                                                                   CCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCGACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGGCGAGGCA                                                                                                      >  3:151186/1‑103                                                                                                   CCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCGACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGGCGAGGCA                                                                                                      <  4:151186/103‑1                                                                                                                                                         CGACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGGCGAGGCATTCGGCCCTAGCGCTGCCGGGCATATCCGCCTGGGCCTGGTGCTGGGTAACGAGGCGCTGGTCGATGCCTGCCAGCGCATTGCCCGCTGCGCCGGCGAAC  >  2:54226/1‑149                                                                                                                                                         CGACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGGCGAGGCATTCGGCCCTAGCGCTGCCGGGCATATCCGCCTGGGCCTGGTGCTGGGTAACGAGGCGCTGGTCGATGCCTGCCAGCGCATTGCCCGCTGCGCCGGCGAAC  <  6:68488/149‑1                                                                                                                                                                                                                                                                                                               ATACGCTGGACGGTGTGCTCACGCATCCGTCTGCCCGCGCATCAGTTCGCCGGCGCAGCGGGCAATGCGCTGGCAGGCATCGACCAGCGCCTCGTTACCCAGCACCAGGCCCAGGCGGATATGCCCGGCAGCGCTAGGGCCGAATGCCTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4243812‑4243965 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgACTACCTGTTGGACAGCCAGGGCGTGTCGGTGCTTGCCGGCGAGGCATTCGGCCCTAGCGCTGCCGGGCATATCCGCCTGGGCCTGGTGCTGGGTAACGAGGCGCTGGTCGATGCCTGCCAGCGCATTGCCCGCTGCGCCGGCGAAC  <  NC_002947/4244002‑4243856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.