New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4447126 =	33 (0.630)	3 (0.060)	3/256	NT	7.7%	coding (439/1149 nt)	nicC	6‑hydroxynicotinate 3‑monooxygenase
	?	NC_002947	4447167 =	40 (0.800)					coding (398/1149 nt)	nicC	6‑hydroxynicotinate 3‑monooxygenase

GAAAAGATCGTCGACGAAGGTGACCAAGTGCGCCTGGACTTCGCCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4447174‑4447126 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGCCGTATTCGCGGCGGGCAAACTCGCCCAGCGGAATGCGCGACAGGTAAT  >  NC_002947/4447167‑4447314                                                                                                                                                                                                       GAAAAGATCGTCGACGAAGGTGACCAAGTGCGCCTGGACTTCGCCGACGATCTTTTCCAGGCGCTTGCAGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGC                                                  >  6:258850/1‑149        TCGTCGACGAAGGTGACCAAGTGCGCCTGGACTTCGCCGACGATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGA                                                                    >  7:24752/1‑124        TCGTCGACGAAGGTGACCAAGTGCGCCTGGACTTCGCCGACGATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGA                                                                    <  8:24752/124‑1                                              GACGATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGCCGTATTCGCGGCGGGCAAACTCGCCCAGCGGAATGCGCGACAGG      <  8:90996/148‑1                                               ACGATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGCCGTATTCGCGGCGGGCAAACTCGCCCAGCGGAATGCGCGACAGGTA    <  3:179355/149‑1                                               ACGATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGCCGTATTCGCGGCGG                                    >  5:125982/1‑117                                               ACGATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGCCGTATTCGCGGCGG                                    <  6:125982/117‑1                                                 GATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGCCGTATTCGCGGCGGGCAAACTCGCCCAGCGGAATGCGCGACAGGTAAT  >  8:299250/1‑149                                                 GATCTATTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCAACGGTGGATGGTGATGTAGGCAGCGCAGTATTCGCGGCGGGCAACCTCGCCCAGCGGAATGCGAGACAGGTAAT  >  6:83126/1‑149                                                                                                                                                                                                       GAAAAGATCGTCGACGAAGGTGACCAAGTGCGCCTGGACTTCGCCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4447174‑4447126 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacgATCTTTTCCAGGCGCTTGCCGAAGTGCACGGTGCCCGGCTGGATGGCCTCGATCTGCAGGGCGTGCAGGTCGCCACGGTGGATGGTGATGTAGGCAGCGCCGTATTCGCGGCGGGCAAACTCGCCCAGCGGAATGCGCGACAGGTAAT  >  NC_002947/4447167‑4447314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.