New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4926807 | 41 (0.790) | 3 (0.060) | 3/256 | NT | 6.6% | coding (1075/1113 nt) | cheBA | chemotaxis response regulator protein‑glutamate methylesterase |
? | NC_002947 | = 4926840 | 45 (0.900) | coding (1042/1113 nt) | cheBA | chemotaxis response regulator protein‑glutamate methylesterase |
GATCAGAGCCGCCGGGCCATTGACCAGAGCACCGACATGACCGCCTTCAAGGAAGTTGCCACCGACAATGGCAACGAAAGCCAGGATCAGACCGATCAGGCTGAGGACGTCCATCAGACGCACGCCTCCACCAGGTGCTTGCCGATTTCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4926656‑4926807 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtcAAGGCGAACCTGGCGGATGCCGTGTACAGCCTCGACGAAATCGGCAAGCACCTGGTGGAGGCGTGCGTCTGATGGACGTCCTCAGCCTGATCGGTCTGATCCTGGCTTTCGTTGCCATTGTCGGTGGCAACTTCCTTGAAGGCGGT < NC_002947/4926840‑4926695 GATCAGAGCCGCCGGGCCATTGACCAGAGCACCGACATGACCGCCTTCAAGGAAGTTGCCACCGACAATGGCAACGAAAGCCAGGATCAGACCGATCAGGCTGAGGACGTCCATCAGACGCACGCCTCCACCAGGTGCTTGCCGATTTC > 7:208944/1‑149 CGCCTTCAAGGAAGTTGCCACCGACAATGGCAACGAAAGCCAGGATCAGACCGATCAGGCTGAGGACGTCCATCAGACGCACGCCTCCACCAGGTGCTTGTCGATTTCGTCAAGGCGAACCTGGCGGATGCCGTGTACAGCCTCGACGA < 1:240667/149‑1 TTGCCACCGACAATGGCAACGAAAGCCAGGATCAGACCGATCAGGCTGAGGACGTCCATCAGACGCACGCCTCCACCAGGTGCTTGCCGATTTCGTCAAGGCGAACCTGGCGGATGCCGTGTACAGCCTCGAC > 7:110696/1‑133 TTGCCACCGACAATGGCAACGAAAGCCAGGATCAGACCGATCAGGCTGAGGACGTCCATCAGACGCACGCCTCCACCAGGTGCTTGCCGATTTCGTCAAGGCGAACCTGGCGGATGCCGTGTACAGCCTCGAC < 8:110696/133‑1 GTCAAGGCGAACCTGGCGGATGCCGTGTACAGCCTCGACGAAATCGGCAAGCACCTGGTGGAGGCGTGCGTCTGATGGACGTCCTCAGCCTGATCGGTCTGATCCTGGCTTTCGTTGCCATTGTCGGTGGCAACTTCCTTGAAGGCGGT > 1:100861/1‑149 GATCAGAGCCGCCGGGCCATTGACCAGAGCACCGACATGACCGCCTTCAAGGAAGTTGCCACCGACAATGGCAACGAAAGCCAGGATCAGACCGATCAGGCTGAGGACGTCCATCAGACGCACGCCTCCACCAGGTGCTTGCCGATTTCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4926656‑4926807 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtcAAGGCGAACCTGGCGGATGCCGTGTACAGCCTCGACGAAATCGGCAAGCACCTGGTGGAGGCGTGCGTCTGATGGACGTCCTCAGCCTGATCGGTCTGATCCTGGCTTTCGTTGCCATTGTCGGTGGCAACTTCCTTGAAGGCGGT < NC_002947/4926840‑4926695 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |