| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4999641 = | 36 (0.690) | 3 (0.060) | 3/254 | NT | 6.9% | coding (494/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter |
| ? | NC_002947 | 4999711 = | 47 (0.950) | coding (564/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter | |||||
GCAATTTCGCTGCCGCCCAGGGAGAAAATCACCACGATAACGCCGGCCATCACCGGTGACAGGCCGTTGGGCATGAAGCCGTCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4999794‑4999641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccaTGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGCG > NC_002947/4999711‑4999856 GCAATTTCGCTGCCGCCCAGGGAGAAAATCACCACGATAACGCCGCCCATCACCCGTGACAGGCCGTTGGGCATGAAGCCGTCATGGGCGGTGAGGTTGATCACGCCTGGGCCGGGAATATCACTGTCCAGGCCGAGCAGGAACGAGAC > 8:244756/1‑149 AATTTCGCTGCCGCCCAGGGAGAAAATCACCACGATAACGCCGGCCATCACCGGTGACAGGCCGTTGGGCATGAAGCCGTCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGC < 1:156928/149‑1 GTCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAG > 3:112731/1‑149 TCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGC > 3:307836/1‑149 GATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGG < 4:112731/148‑1 GACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAA < 4:307836/149‑1 CGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGA < 3:89206/149‑1 GCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAG > 2:24989/1‑149 CCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGTCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGC < 2:213645/149‑1 CCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTCGTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGC < 1:89092/149‑1 CCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGCG < 3:176844/149‑1 GCAATTTCGCTGCCGCCCAGGGAGAAAATCACCACGATAACGCCGGCCATCACCGGTGACAGGCCGTTGGGCATGAAGCCGTCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4999794‑4999641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccaTGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCT‑GTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGCG > NC_002947/4999711‑4999856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |