New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4999641 =	36 (0.690)	3 (0.060)	3/254	NT	6.9%	coding (494/1383 nt)	PP_4407	gamma‑aminobutyrate transporter
	?	NC_002947	4999711 =	47 (0.950)					coding (564/1383 nt)	PP_4407	gamma‑aminobutyrate transporter

TTCCTGCCCTGGCTACCGATCTGGGCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCA  >  NC_002947/4999493‑4999784                                                                                                                                                     |                                                                                                                                                 ttCCTGCCCTGGCTACCGATCTGGGCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATgctgct                                                                                                                                                  >  3:115003/1‑149 (MQ=255)   gctcttgatcgcgcggatcacgttctgtcgggggttctctgattcacccgcggccacgagcggcaatttcgctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTgg                                                                                                                                                <  1:89092‑M1/3‑1 (MQ=255)   cgctcttgatcgcgcggatcacgttctgtcgggggttctctgattcacccgcggccacagcggcaatttcgctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTgg                                                                                                                                                <  3:176844‑M1/3‑1 (MQ=255)   ccTGCCCTGGCTACCGATCTGGGCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATgctgct                                                                                                                                                  <  4:115003/147‑1 (MQ=255)    gctcttgatcgcgcggatcacgttctgtcgggggttctctgattcacccgcggccacagcggcaatttcgctgccgcccagggagaaaatcaccacgataacgacggccatcaccggtgacaggccgttgggcatgaagccgtcaTggg                                                                                                                                               <  2:213645‑M1/4‑1 (MQ=255)     tGCCCTGGCTACCGATCTGGGCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGATGGCCGCGTTGAAGGTCGCCACCATCGTTATCTTCATGCTGCTGGGc                                                                                                                                              >  2:178913/1‑149 (MQ=255)     ctcttgatcgcgcggatcacgttctgtcgggggttctctgattcacccgcggccacagcggcaatttcgctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTGGGc                                                                                                                                              >  2:24989‑M1/145‑149 (MQ=255)      tcttgatcgcgcggatcacgttctgtcgggggttctctgattcacccgcggccacagcggcaatttcgctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTGGGCg                                                                                                                                             <  3:89206‑M1/6‑1 (MQ=255)       cccTGGCTACCGATCTGGGCAGGCGCCTTCCTGAAGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGt                                                                                                                                            <  6:264590/149‑1 (MQ=255)        ttgatcgcgcggatcacgttctgtcgggggttctctgattcacccgcggccacagcggcaatttcgctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTGGGCGtc                                                                                                                                           <  4:307836‑M1/8‑1 (MQ=255)              tACCGATCTGGGCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATc                                                                                                                                     >  3:60912/1‑149 (MQ=255)                   aTCTGGGCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCt                                                                                                                                >  5:30081/1‑149 (MQ=255)                        ggCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCt                                                                                                                                <  8:15115/144‑1 (MQ=255)                         gCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCt                                                                                                                          >  6:35421/1‑149 (MQ=255)                             gcgcCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGcac                                                                                                                      <  6:30081/149‑1 (MQ=255)                               gcCTTCCTGATGCTGGTGACACTCATGTCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGGCGCCACCATCCTTATCTTCATGCTGCTCGGCGTCTCGATCCTGCTCGGCCt                                                                                                                          <  7:166533/143‑1 (MQ=255)                               gcCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCATGCTCGGcat                                                                                                                          >  8:166533/1‑141 (MQ=255)                                ccTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGt                                                                                                                   <  8:106765/149‑1 (MQ=255)                                         tGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTccc                                                                                                          <  5:117796/149‑1 (MQ=255)                                            tGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGcc                                                                                                       >  1:127047/1‑149 (MQ=255)                                                   acTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGc‑c                                                                                               >  7:292912/1‑149 (MQ=255)                                                     tCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑Ct                                                                                              >  8:190162/1‑148 (MQ=255)                                                        tGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGAt                                                                                           >  5:235831/1‑148 (MQ=255)                                                         ccacagcggcaatttcgctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATc                                                                                          <  4:112731‑M1/56‑1 (MQ=255)                                                          gCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCaa                                                                                        >  7:212821/1‑149 (MQ=255)                                                                  cGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCg                                                                                >  5:151138/1‑149 (MQ=255)                                                                        cTCGGTGTGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCAt                                                                           <  3:35790/148‑1 (MQ=255)                                                                        cTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCa                                                                            <  8:212821/147‑1 (MQ=255)                                                                         tCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCTACCTCACCGCCCATGa                                                                         >  7:287084/1‑149 (MQ=255)                                                                         gctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGa                                                                         >  3:307836‑M1/77‑149 (MQ=255)                                                                          ctgccgcccagggagaaaatcaccacgataacgccggccatcaccggtgacaggccgttgggcatgaagccgtcaTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGAc                                                                        >  3:112731‑M1/76‑149 (MQ=255)                                                                             tGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGc                                                                     <  5:35421/149‑1 (MQ=255)                                                                                gttcgttTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCtt                                                                   >  1:127129/1‑148 (MQ=255)                                                                                   cgttTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCAt                                                                <  6:235831/148‑1 (MQ=255)                                                                                     tttGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGcc                                                             >  2:148159/1‑149 (MQ=255)                                                                                         ccGAAGTAGAGTATTGGCTGGTCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAAc                                                         >  8:294113/1‑149 (MQ=255)                                                                                            aaGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGc                                                      <  2:127129/149‑1 (MQ=255)                                                                                                      ttGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCgg                                            <  2:285292/149‑1 (MQ=255)                                                                                                                 cgATGAAGGGCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGc                                 <  4:60912/149‑1 (MQ=255)                                                                                                                   aTGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGt                               <  1:148159/149‑1 (MQ=255)                                                                                                                    tGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGt                               >  7:34705/1‑148 (MQ=255)                                                                                                                            gCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCgtggt                      <  7:294113/149‑1 (MQ=255)                                                                                                                                 caTCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCCTGGTGAgtt                 >  7:244756/1‑149 (MQ=255)                                                                                                                                  aTCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGAttt                 >  2:89092/1‑148 (MQ=255)                                                                                                                                      ttATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTcc            >  2:125815/1‑149 (MQ=255)                                                                                                                                        aTCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTccc           <  3:135110/148‑1 (MQ=255)                                                                                                                                           ttCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGCAGGGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGGTATCGTGGTGATTTTCTCCCTgg        >  1:93065/1‑149 (MQ=255)                                                                                                                                             cATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTggg       <  7:190162/147‑1 (MQ=255)                                                                                                                                                 ctgctgGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCa  <  1:178913/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 TTCCTGCCCTGGCTACCGATCTGGGCAGGCGCCTTCCTGATGCTGGTGACACTCATGGCCAGCAACGCCTACTCGGTGCGTTCGTTTGCCGAAGTAGAGTATTGGCTGGCCGCGATGAAGGTCGCCACCATCCTTATCTTCATGCTGCTGGGCGTCTCGATCCTGCTCGGCCTGCACAGTGATATTCCCGCCCCAGGC‑CTGATCAACCTCACCGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCA  >  NC_002947/4999493‑4999784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.