New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5378985	48 (0.920)	4 (0.080)	3/246	NT	8.5%	coding (570/1674 nt)	recN	DNA repair/recombination protein
	?	NC_002947	= 5379036	42 (0.870)					coding (621/1674 nt)	recN	DNA repair/recombination protein

CCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5378831‑5378985 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctgctcCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGGTAACTGAGCAGCTGGTGGCGGGCGCGCTGCTCGTCGCCCGAGTTGGAGAGGCGCTCCAGCTCCAGGCGGGTCTGATTCCAGCGCTTGGCTGCAAGCTGTAC  <  NC_002947/5379036‑5378890                                                                                                                                                                                                                                                                                                                CCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCA                                                                                                                                                            <  1:114542/148‑1  CGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGC                                                                                                                                                          >  7:52816/1‑149     CACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGC                                                                                                                                                       >  3:195249/1‑149     CACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGC                                                                                                                                                       >  3:300391/1‑149      ACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCATCTCGGGCGACGAGCAGCGAGCCCGCCACCAGCTGC                                                                                                                                                       >  5:305891/1‑148        CCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCT                                                                                                                                                      >  1:298409/1‑147        CCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCT                                                                                                                                                      >  4:235393/1‑147                                                     CCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGG                                                                                                       >  8:5328/1‑149                                                     CCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACAAGCAGCGCGCCCGCCACCAGCTGCTCCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGG                                                                                                       >  7:79895/1‑149                                                                     GCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGGTAACTGAGCAGCTGG                                                                                        <  7:5328/148‑1                                                                     GCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACAAGCAGCGCGCCCGCCACCAGCTGCTCCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGGTAACTGAGCAGCTG                                                                                         <  8:79895/147‑1                                                                                                                                                   CAGCTGCTCCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGGTAACTGAGCAGCTGGTGGCGGGCGCGCTGCTCGTCGCCCGAGTTGGAGAGGCGCTCCAGCTCCAGGCGGGTCTGATTCCAGCGCTTGGCTGCAA         <  2:237203/149‑1                                                                                                                                                          TCCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGGTAACTGAGCAGCTGGTGGCGGGCGCGCTGCTCGTCGCCCGAGTTGGAGAGGCGCTCCAGCTCCAGGCGGGTCTGATTCCAGCGCTTGGCTGCAAGCTGTAC  >  6:237824/1‑149                                                                                                                                                                                                                                                                                                                CCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCTGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5378831‑5378985 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctgctcCAGTTCGTGCTCGCCCAGGCCGAGGTTGTCCAGTTCTTCCAGCTGGTAACTGAGCAGCTGGTGGCGGGCGCGCTGCTCGTCGCCCGAGTTGGAGAGGCGCTCCAGCTCCAGGCGGGTCTGATTCCAGCGCTTGGCTGCAAGCTGTAC  <  NC_002947/5379036‑5378890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.