New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5385515	71 (1.360)	4 (0.080)	4/258	NT	5.2%	coding (246/1146 nt)	lldD	L‑lactate dehydrogenase
	?	NC_002947	= 5385542	78 (1.550)					coding (273/1146 nt)	lldD	L‑lactate dehydrogenase

GCACACCCTGCGCCACAACGTCTCGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5385365‑5385515 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCTGCACTTCGCCACGGCGGGCGTACATGCCGGTGA  <  NC_002947/5385542‑5385508                                                                                                                                                                                            GCACACCCTGCGCCACAACGTCTCGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCG                                       >  3:263212/1‑149                                                  CAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCCTGCACTTCGCCACGGCGGGCGTACATGCCGGTGA  >  1:20951/1‑137                                                  CAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCCTGCACTTCGCCACGGCGGGCGTACATGCCGGTGA  <  2:20951/137‑1                                                                                           CAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCCTGCACTTCGCCACGGCGGGCGTACATGCC       >  3:130355/1‑91                                                                                           CAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCCTGCACTTCGCCACGGCGGGCGTACATGCC       <  4:130355/91‑1                                                                                                                                                                                            GCACACCCTGCGCCACAACGTCTCGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5385365‑5385515 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCTGCACTTCGCCACGGCGGGCGTACATGCCGGTGA  <  NC_002947/5385542‑5385508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.