| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5851995 = | 46 (0.880) | 3 (0.060) | 3/250 | NT | 6.7% | coding (299/1089 nt) | PP_5129 | hypothetical protein |
| ? | NC_002947 | 5852035 = | 40 (0.820) | coding (259/1089 nt) | PP_5129 | hypothetical protein | |||||
GCCTGCAAAGCGAAAGAGGTAGTTACCGGGAAGATGTTTGTTACTGAAGTGCGTGAGCTGGACGGTCCACGCTGGATTGTGAATTTTCCAACCAAGCGGCATTGGCGCTCACCTTCGCAAATCGGCTGGATCGTCGAGGGCCTTCATGATTTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5852149‑5851995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatttgcgAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACG > NC_002947/5852035‑5852182 GCCTGCAAAGCGAAAGAGGTAGTTACCGGGAAGATGTTTGTTACTGAAGTGCGTGAGCTGGACGGTCCACGCTGGATTGTGAATTTTCCAACCAAGCGGCATTGGCGCTCACCTTCGCAAATCGGCTGGATCGTCGAGGGCCTTCATGA > 5:26025/1‑149 CCTGCAAAGCGAAAGAGGTAGTTACCGGGAAGATGTTTGTTACTGAAGTGCGTGAGCTGGACGGTCCACGCTGGATTGTGAATTTTCCAACCAAGCGGCATTGGCGCTCACCTTCGCAAATCGGCTGGATCGTCGAGGGCCTTCATGAT < 3:225709/149‑1 CTTCGCAAATCGGCTGGATCGTCGAGGGCCTTCATGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTT > 5:281540/1‑146 CTTCGCAAATCGGCTGGATCGTCGAGGGCCTTCATGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTT < 6:281540/146‑1 TTCGCAAATCGGCTGGATCGTCGAGGGCCTTCATGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCT > 5:148314/1‑149 TGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAA > 2:39058/1‑148 GAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGTAGCATACTGGCGATAGTTCTCGACAAAACG < 1:28443/149‑1 GAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACG > 4:114034/1‑149 GAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACG < 4:52878/149‑1 GAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACG > 7:76793/1‑149 GAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACA > 3:198481/1‑82 GAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACA < 4:198481/82‑1 GCCTGCAAAGCGAAAGAGGTAGTTACCGGGAAGATGTTTGTTACTGAAGTGCGTGAGCTGGACGGTCCACGCTGGATTGTGAATTTTCCAACCAAGCGGCATTGGCGCTCACCTTCGCAAATCGGCTGGATCGTCGAGGGCCTTCATGATTTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5852149‑5851995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatttgcgAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACG > NC_002947/5852035‑5852182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |