| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5851995 = | 46 (0.880) | 3 (0.060) | 3/250 | NT | 6.7% | coding (299/1089 nt) | PP_5129 | hypothetical protein |
| ? | NC_002947 | 5852035 = | 40 (0.820) | coding (259/1089 nt) | PP_5129 | hypothetical protein | |||||
GCACCCTCTGAATCTGTTCTCGTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACG > NC_002947/5851888‑5852182 | gCACCCTCTGAATCTGTTCTCGTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGaa < 2:51470/149‑1 (MQ=255)gCACCCTCTGAATCTGTTCTCGTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGaa < 2:46783/149‑1 (MQ=255)agcgaaagaggtagttaccgggaagatgtttgttactgaagtgcgtgagctggacggtccacgctggattgtgaattttccaaccaagcggcattggcgctcaccttCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGaa > 5:148314‑M1/108‑149 (MQ=255) aaagaggtagttaccgggaagatgtttgttactgaagtgcgtgagctggacggtccacgctggattgtgaattttccaaccaagcggcattggcgctcaccttCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAg < 6:281540‑M1/43‑1 (MQ=255) aaagaggtagttaccgggaagatgtttgttactgaagtgcgtgagctggacggtccacgctggattgtgaattttccaaccaagcggcattggcgctcaccttCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAg > 5:281540‑M1/104‑146 (MQ=255) tctGAATCTGTTCTCGTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGaa > 2:58052/1‑143 (MQ=255) tctGAATCTGTTCTCGTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGaa < 1:58052/143‑1 (MQ=255) cTGTTCTCGTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAAt > 6:221040/1‑149 (MQ=255) gTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTTGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCttg > 4:151452/1‑149 (MQ=255) gTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTTGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCttg < 3:151452/149‑1 (MQ=255) gTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCtt < 2:87094/148‑1 (MQ=255) ccGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGGTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCttggt < 4:189445/148‑1 (MQ=255) cGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGcttgcttg > 4:148170/1‑149 (MQ=255) cGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCttggttg > 1:317834/1‑149 (MQ=255) cAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGa < 2:71277/149‑1 (MQ=255) cAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAAtt > 7:96943/1‑149 (MQ=255) ctgACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTc < 7:287009/147‑1 (MQ=255) aGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTca < 2:87275/149‑1 (MQ=255) aCAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTc > 8:287009/1‑146 (MQ=255) cccTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATc > 6:26025/1‑148 (MQ=255) cccTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATc > 2:288535/1‑148 (MQ=255) cAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCg > 2:186555/1‑149 (MQ=255) cAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGc > 2:28443/1‑149 (MQ=255) gATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACtt < 1:288535/149‑1 (MQ=255) tAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCa < 2:19720/135‑1 (MQ=255) tAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCa > 1:19720/1‑135 (MQ=255) tAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCa < 3:148170/149‑1 (MQ=255) gCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGt < 2:317834/149‑1 (MQ=255) aTGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTaacaaa > 3:286905/1‑148 (MQ=255) aTGCCACCTGGTTATTGATAATGAAGTTGCGCAAAGCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTaacaaac < 6:330101/149‑1 (MQ=255) caacTGGTTATTGATAATGAAGTTGCGAAAATCATGAAGTCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGTTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCt < 5:274737/146‑1 (MQ=255) cTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTcc < 4:286905/149‑1 (MQ=255) gTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCg < 1:186555/148‑1 (MQ=255) gTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCg < 5:221040/148‑1 (MQ=255) tATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGt > 7:114028/1‑148 (MQ=255) aTTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTaa > 4:44386/1‑149 (MQ=255) tAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCAAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTAcc > 8:247770/1‑149 (MQ=255) aTGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACctc > 3:52878/1‑149 (MQ=255) tGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGAc > 6:98344/1‑99 (MQ=255) aaGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCtt < 8:114028/148‑1 (MQ=255) aGTTCCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTc < 8:153021/149‑1 (MQ=255) cttcgcaaatcggctggatcgtcgagggccttcatgatttgcgAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCttt < 6:281540‑M2/103‑1 (MQ=255) cttcgcaaatcggctggatcgtcgagggccttcatgatttgcgAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCttt > 5:281540‑M2/44‑146 (MQ=255) ttcgcaaatcggctggatcgtcgagggccttcatgatttgcgAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCt > 5:148314‑M2/43‑149 (MQ=255) ATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTgcagg < 3:225709‑M1/149‑1 (MQ=255) TCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTgcaggc > 5:26025‑M1/1‑149 (MQ=255) aTGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACCCACtt < 5:219481/101‑1 (MQ=255) aTGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACCCACtt > 6:219481/1‑101 (MQ=255) aGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGgcagcagc < 3:5737/149‑1 (MQ=255) cTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTgcag > 4:208961/1‑136 (MQ=255) cTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTgcag < 3:208961/136‑1 (MQ=255) gacgaTCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTgg < 3:44386/148‑1 (MQ=255) aGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTaacaaac < 2:17709/92‑1 (MQ=255) aGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTaacaaac > 1:17709/1‑92 (MQ=255) gCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTACCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTtct > 7:11954/1‑149 (MQ=255) tgcgAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACaa > 2:39058‑M2/5‑148 (MQ=255) gAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTaacaaaca < 4:198481‑M2/81‑1 (MQ=255) gAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTaacaaaca > 3:198481‑M2/2‑82 (MQ=255) gAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGTAGCATACTGGCGATAGTTCTCGACAAAACg < 1:28443‑M2/148‑1 (MQ=255) gAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACg < 4:52878‑M2/148‑1 (MQ=255) gAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACg > 4:114034‑M2/2‑149 (MQ=255) gAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACg > 7:76793‑M2/2‑149 (MQ=255) | GCACCCTCTGAATCTGTTCTCGTACCGCAGCCCAAGACAACCCTCCATTACCAGCACCAAGTGGAGGGATAGCAATCGATGCCACCTGGTTATTGATAATGAAGTTGCGCAAATCATGAAGGCCCTCGACGATCCAGCCGATTTGCGAAGGTGAGCGCCAATGCCGCTTGGTTGGAAAATTCACAATCCAGCGTGGACCGTCCAGCTCACGCACTTCAGTAACAAACATCTTCCCGGTAACTACCTCTTTCGCTTTGCAGGCAGCAGCATACTGGCGATAGTTCTCGACAAAACG > NC_002947/5851888‑5852182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |