New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5874873	55 (1.060)	7 (0.140)	4/258	NT	12.7%	coding (1298/1515 nt)	ilvA‑II	threonine deaminase
	?	NC_002947	= 5874924	43 (0.850)					coding (1247/1515 nt)	ilvA‑II	threonine deaminase

AGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5874723‑5874873 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCCGAGCGGCCAGGGGCACTGTTCAACTTCCTCAACAAGCTGGGCGGGCGCTGGAACATCTCGATGTTCCACTACCGCAACCATGGCGCGGCTGACGGGCGC  <  NC_002947/5874924‑5874779                                                                                                                                                                                                                                                                                                           AGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGG                                                                                                                                                      <  8:34007/149‑1                                             CCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAAT                                                                                                          >  1:79712/1‑149                                                   CACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCC                                                                                                     >  2:1773/1‑148                                                   CACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCC                                                                                                     >  2:7107/1‑148                                                         GCGCCCGTCAGCCTCGCCATGGTTGAGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGTAAGTTGAACAGTGCCCCTGGCCACTCGGCCGGTGCCAGCGACGAAATTGTGCTGCGCTTCGAATTCCCCGCGCGGC                                                                                              <  7:292449/149‑1                                                           GCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCCGAGCGGCCA                                                                                            <  1:1773/149‑1                                                           GCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCCGAGCGGCCA                                                                                            <  1:7107/149‑1                                                           GCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCAGAGCGGCCA                                                                                            <  2:79712/149‑1                                                                                                                                                     GCCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCCGAGCGGCCAGGGGCACTGTTCAACTTCCTCAACAAGCTGGGCGGGCGCTGGAACATCTCGATGTTCCACTACCGCAACCATGGCGCGGCTGACGGGCGC  <  5:148728/149‑1                                                                                                                                                      CCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCCGAGCGGCCAGGGGCACTGTTCAACTTCCTCAACAAGCTGGGCGGGCGCTGGAACATCTCGATGTTCCACTACCGCAACCATG                   <  1:77413/131‑1                                                                                                                                                      CCACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCCGAGCGGCCAGGGGCACTGTTCAACTTCCTCAACAAGCTGGGCGGGCGCTGGAACATCTCGATGTTCCACTACCGCAACCATG                   >  2:77413/1‑131                                                                                                                                                                                                                                                                                                           AGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5874723‑5874873 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACTCGGCCGGTGCCAGCGACGAAATGGTGCTGCGCTTCGAATTCCCCGAGCGGCCAGGGGCACTGTTCAACTTCCTCAACAAGCTGGGCGGGCGCTGGAACATCTCGATGTTCCACTACCGCAACCATGGCGCGGCTGACGGGCGC  <  NC_002947/5874924‑5874779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.