New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5874873	55 (1.060)	7 (0.140)	4/258	NT	12.7%	coding (1298/1515 nt)	ilvA‑II	threonine deaminase
	?	NC_002947	= 5874924	43 (0.850)					coding (1247/1515 nt)	ilvA‑II	threonine deaminase

CTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGTTCGGTCAGTTGCTGCACCAGC  >  NC_002947/5874727‑5875019                                                                                                                                                     |                                                                                                                                                   cTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGc                                                                                                                                                  >  8:247325/1‑149 (MQ=255)      ggCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCggg                                                                                                                                             <  8:227220/149‑1 (MQ=255)               tGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGaa                                                                                                                                    <  2:218132/149‑1 (MQ=255)               tGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGaa                                                                                                                                    <  6:255982/149‑1 (MQ=255)                   gTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAgcgc                                                                                                                                <  3:129466/149‑1 (MQ=255)                   gTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAgcg                                                                                                                                 >  7:27402/1‑148 (MQ=255)                         cctccGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCAcc                                                                                                                          <  6:230061/149‑1 (MQ=255)                          ctccGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATACGAAGCGCGGCAc                                                                                                                           >  1:248705/1‑148 (MQ=255)                           tccGGCACCTGCAGCCCCGCCACCACGCGCCTGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCAt                                                                                                                        >  4:272886/1‑149 (MQ=255)                              ggCACCTGCAGCCCCGCCACCACGCGCCTGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTtc                                                                                                                     <  3:272886/149‑1 (MQ=255)                                     gCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTtc                                                                                                                     <  1:61002/142‑1 (MQ=255)                                     gCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTtc                                                                                                                     >  2:61002/1‑142 (MQ=255)                                      cAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTTGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCt                                                                                                               <  1:235731/148‑1 (MQ=255)                                      cAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCt                                                                                                               <  6:159863/147‑1 (MQ=255)                                       aGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGc                                                                                                            <  5:131893/149‑1 (MQ=255)                                         ccccGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCactcggccggtgccagcgacgaaatggtgctgcgcttcgaat                                                                                                          >  1:79712‑M1/1‑107 (MQ=255)                                         ccccGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCCGCACCATTTCGTCGCTGGCAc                                                                                                          >  3:191077/1‑149 (MQ=255)                                         ccccGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTtcgt                                                                                                                   <  4:154068/140‑1 (MQ=255)                                         ccccGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTtcgt                                                                                                                   >  3:154068/1‑140 (MQ=255)                                         ccccGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCAc                                                                                                          >  8:139502/1‑149 (MQ=255)                                             gCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑AGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGc                                                                                                      >  5:136645/1‑149 (MQ=255)                                               caccacGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCactcggccggtgccagcgacgaaatggtgctgcgcttcgaattcccc                                                                                                     >  2:1773‑M1/1‑101 (MQ=255)                                               caccacGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCactcggccggtgccagcgacgaaatggtgctgcgcttcgaattcccc                                                                                                     >  2:7107‑M1/1‑101 (MQ=255)                                                accacGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGa                                                                                                   <  4:310656/149‑1 (MQ=255)                                                  cacGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGt                                                                                                 >  7:25276/1‑149 (MQ=255)                                                     gcgcCCGTCAGCCTCGCCATGGTTGA‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGTAAGTTGAACAG‑TGCCCCTGGCCactcggccggtgccagcgacgaaattgtgctgcgcttcgaattccccgcgcggc                                                                                              <  7:292449‑M1/149‑55 (MQ=255)                                                     gcgcCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTggc                                                                                              <  5:148728‑M2/149‑4 (MQ=255)                                                       gcCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCactcggccggtgccagcgacgaaatggtgctgcgcttcgaattccccgagcggcca                                                                                            <  1:7107‑M1/149‑57 (MQ=255)                                                       gcCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCactcggccggtgccagcgacgaaatggtgctgcgcttcgaattccccgagcggcca                                                                                            <  1:1773‑M1/149‑57 (MQ=255)                                                       gcCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCactcggccggtgccagcgacgaaatggtgctgcgcttcgaattcccagagcggcca                                                                                            <  2:79712‑M1/149‑57 (MQ=255)                                                       gcCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGgccg                                                                                            >  3:172991/1‑149 (MQ=255)                                                           gTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGa                                                                                        <  8:25276/149‑1 (MQ=255)                                                            tCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGAc                                                                                       >  2:173790/1‑149 (MQ=255)                                                                    gcCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGAc                                                                               <  7:156003/149‑1 (MQ=255)                                                                      cATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTtcgtcg                                                                                                                 >  8:178990/1‑113 (MQ=255)                                                                      cATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTtcgtcg                                                                                                                 <  7:178990/113‑1 (MQ=255)                                                                      cATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTgg                                                                                               >  2:77413‑M2/1‑129 (MQ=255)                                                                      cATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTgg                                                                                               <  1:77413‑M2/131‑3 (MQ=255)                                                                        tGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAat                                                                           <  2:248705/149‑1 (MQ=255)                                                                              c‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCg                                                                                                        >  1:116802/1‑114 (MQ=255)                                                                              c‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCg                                                                                                        <  2:116802/114‑1 (MQ=255)                                                                                  tAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCtt                                                                  <  4:172991/149‑1 (MQ=255)                                                                                      ggAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGgccgcc                                                                                          <  5:144995/121‑1 (MQ=255)                                                                                      ggAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGgccgcc                                                                                          >  6:144995/1‑121 (MQ=255)                                                                                       gAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGcc                                                              >  7:101537/1‑148 (MQ=255)                                                                                            tCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCg                                                        >  8:72893/1‑149 (MQ=255)                                                                                            tCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCg                                                        <  5:234380/149‑1 (MQ=255)                                                                                              gagaTGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGtt                                                      <  8:27402/149‑1 (MQ=255)                                                                                                      ccAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGt                                                >  2:195213/1‑147 (MQ=255)                                                                                                      ccAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGt                                                >  7:247049/1‑147 (MQ=255)                                                                                                      ccAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTc                                               <  7:247325/148‑1 (MQ=255)                                                                                                         gcgcCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGAt                                           <  6:148728/149‑1 (MQ=255)                                                                                                           gcccgcccAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCg                                         <  7:72893/149‑1 (MQ=255)                                                                                                                 ccAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAAcc                                   >  5:80537/1‑149 (MQ=255)                                                                                                                 ccAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAAcc                                   >  5:75818/1‑149 (MQ=255)                                                                                                                 ccAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCACCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTaa                                     >  7:33749/1‑147 (MQ=255)                                                                                                                      ttgttgAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCggg                                >  7:154944/1‑147 (MQ=255)                                                                                                                            aGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTg                        >  1:100841/1‑149 (MQ=255)                                                                                                                             ggAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGt                       >  2:111812/1‑149 (MQ=255)                                                                                                                              gAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGtt                      >  1:165473/1‑149 (MQ=255)                                                                                                                              gAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGtt                      <  1:111812/149‑1 (MQ=255)                                                                                                                                cgTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGATTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGTTCg                    <  4:191077/148‑1 (MQ=255)                                                                                                                                    gAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCAGCCGACCATATGACGAATATGCAGGTTGGCCAATTCCTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGTTCGGt                  >  2:238191/1‑147 (MQ=255)                                                                                                                                      aCAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGTTCGGTCAGt              <  1:110060/149‑1 (MQ=255)                                                                                                                                        aG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCAGACCATATGACGAATATGAAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGTTCGGTCAGtt             >  8:197661/1‑148 (MQ=255)                                                                                                                                         g‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGTCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGTTCGGTCAGTtgc           <  7:139502/149‑1 (MQ=255)                                                                                                                                                 tGGCCGCTCTGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTggccaggggcactgttcaacttcctcaacaagctgggcgggcgctggaacatctcgatgttccactaccgcaaccatggcgcggctgacgggc    <  2:79712‑M2/149‑94 (MQ=255)                                                                                                                                                 tGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTggccaggggcactgttcaacttcctcaacaagctgggcgggcgctggaacatctcgatgttccactaccgcaaccatggcgcggctgacgggc    <  1:7107‑M2/149‑94 (MQ=255)                                                                                                                                                 tGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTggccaggggcactgttcaacttcctcaacaagctgggcgggcgctggaacatctcgatgttccactaccgcaaccatggcgcggctgacgggc    <  1:1773‑M2/149‑94 (MQ=255)                                                                                                                                                   gCCactcggccggtgccagcgacgaaatggtgctgcgcttcgaattccccgagcggccaggggcactgttcaacttcctcaacaagctgggcgggcgctggaacatctcgatgttccactaccgcaaccatggcgcggctgacgggcgc  <  5:148728‑M1/149‑147 (MQ=255)                                                                                                                                                   gCCGCGCGGGGAATTCGAAGCGCAGCACAATTTCGTCGCTGGCACCGGCCGAGTggccaggggcactgttcaacttactcaacaagctgggcgggcgctggaacatctcgatgttccactacctcaaccatggcgaggctgacgggcgc  <  7:292449‑M2/149‑96 (MQ=255)                                                                                                                                                    ccactcggccggtgccagcgacgaaatggtgctgcgcttcgaattccccgagcggccaggggcactgttcaacttcctcaacaagctgggcgggcgctggaacatctcgatgttccactaccgcaaccatg                   >  2:77413‑M1/1‑2 (MQ=255)                                                                                                                                                    ccactcggccggtgccagcgacgaaatggtgctgcgcttcgaattccccgagcggccaggggcactgttcaacttcctcaacaagctgggcgggcgctggaacatctcgatgttccactaccgcaaccatg                   <  1:77413‑M1/131‑130 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGC‑GGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAG‑TGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCACCGGCCGAGTGGCCGCCGACCATATGACGAATATGCAGCTTGGCCAATTCGTTGTCGGTCAGATCGGTAACCGGGAAGCCCTGTTCGGTCAGTTGCTGCACCAGC  >  NC_002947/5874727‑5875019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.