| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6175589 | 70 (1.340) | 5 (0.100) | 5/258 | NT | 6.8% | coding (1008/1377 nt) | atpD | ATP synthase subunit beta |
| ? | NC_002947 | = 6175633 | 69 (1.370) | coding (964/1377 nt) | atpD | ATP synthase subunit beta | |||||
GTCGGCTTCGGACAGTTCGTCCATACCCAGGATCGCAATGATGTCCTTCAGCTCTTTATAGCGCTGCAGAACATACTGAACGCCACGAGCGGTCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6175442‑6175589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGTATGTTCTGCAGCGCTATAAAGAGCTGAAG < NC_002947/6175633‑6175487 GTCGGCTTCGGACAGTTCGTCCATACCCAGGATCGCAATGATGTCCTTCAGCTCTTTATAGCGCTGCAGAACATACTGAACGCCACGAGCGGTCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTC > 6:6754/1‑147GTCGGCTTCGGACAGTTCGTCCATACCCAGGATCGCAATGATGTCCTTCAGCTCTTTATAGCGCTGCAGAACATACTGAACGCCACGAGCGGTCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTC < 6:76527/147‑1 TTCGTCCATACCCAGGATCGCAATGATGTCCTTCAGCTCTTTATAGCGCTGCAGAACATACTGAACGCCACGAGCGGTCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTCCCGTGACATCGCCTCCC > 5:271591/1‑149 TTTATAGCGCTGCATAAGATACTGAACGCCACTAGCGGTATCGTAGTGCTCGTTGCCTATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTCCCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGAC < 6:271591/147‑1 TATAGCGCTGCAGAACATACTGAACGCCACGAGCGGTCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTCCCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTT < 4:231095/147‑1 TCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTCCCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTG > 5:24183/1‑101 TCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTCCCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTG < 6:24183/101‑1 GTCCCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGTATGTTCTGCAGCGCTATAAAGAGCTG > 4:106110/1‑148 GTCCCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGTATGTTCTGCAGCGCTATAAAGAGCTG > 8:35181/1‑148 TCCCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGTATGTTCTGCAGCGCTATAAAGAGCTGAA < 1:110677/149‑1 CCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGTATGTTCTGCAGCGCTATAAAGAGCTGAAG > 3:201215/1‑148 CCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGTATGTTCTGCAGCGCTATAAAGAGCTGAAG < 7:35181/148‑1 CCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGT > 3:142010/1‑119 CCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGT < 4:142010/119‑1 GTCGGCTTCGGACAGTTCGTCCATACCCAGGATCGCAATGATGTCCTTCAGCTCTTTATAGCGCTGCAGAACATACTGAACGCCACGAGCGGTCTCGTAGTGCTCGTTGCCGATCACGTTCGGGTCCAGCTGGCGCGAAGTCGAGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6175442‑6175589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccCGTGACATCGCCTCCCTGGGTATCTACCCAGCGGTCGACCCACTGGACTCGACTTCGCGCCAGCTGGACCCGAACGTGATCGGCAACGAGCACTACGAGACCGCTCGTGGCGTTCAGTATGTTCTGCAGCGCTATAAAGAGCTGAAG < NC_002947/6175633‑6175487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |