New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1195376	40 (0.770)	4 (0.080)	4/248	NT	9.5%	coding (1515/1653 nt)	uxpA	lipoprotein UxpA
	?	NC_002947	= 1195402	39 (0.800)					coding (1541/1653 nt)	uxpA	lipoprotein UxpA

TGGACAACAGCCAGGACCTGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCACCCACGGCAATTGGCCTCGTGATGCTCACCTC  >  NC_002947/1195237‑1195524                                                                                                                                            |                                                                                                                                                     tgGACAACAGCCAGGACCTGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCa                                                                                                                                             >  8:138922/1‑149 (MQ=255)   gACAACAGCCAGGACCTGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCtcgacccgctg                                                                                                                                           >  3:299367‑M1/1‑138 (MQ=255)   gACAACAGCCAGGACCTGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCAc                                                                                                                                            <  7:29508/148‑1 (MQ=255)      aacaGCCAGGACCTGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGa                                                                                                                                                 >  6:277254/1‑140 (MQ=255)      aacaGCCAGGACCTGCCGCGCTGGCAGGGCCACGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGa                                                                                                                                                 <  5:277254/140‑1 (MQ=255)            cAGGACCTGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCg                                                                                                                                  <  7:174531/149‑1 (MQ=255)                   tGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAg                                                                                                                           <  5:13927‑M2/149‑2 (MQ=255)                     ccGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAgg                                                                                                                          >  4:285978‑M2/1‑146 (MQ=255)                     ccGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAg                                                                                                                           >  1:45786‑M2/1‑146 (MQ=255)                       gcgcTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAATGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAggcct                                                                                                                       <  1:226406‑M2/149‑6 (MQ=255)                       gcgcTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAggcct                                                                                                                       <  3:42793‑M2/149‑6 (MQ=255)                        cgcTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCtcgacccgctgccacagtggctcgccggcctg                                                                                                                      <  2:270011‑M1/149‑33 (MQ=255)                         gcTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCtcgacccgctgccacagtggctcgccggcctgg                                                                                                                     <  3:10828‑M1/149‑34 (MQ=255)                         gcTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAggcctgg                                                                                                                     >  7:75959‑M2/1‑142 (MQ=255)                            ggCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCCAGGCAAGCGCATCACGGGGGTGGCGCCGGTGCAGGGACGGTGACGCACCTTTGGCCTGCAGTTCGAAAGCCCGGCCGGCGAGCCCCTGTGGCAGCGGGTCGCGGCCTGGCTc                                                                                                                  >  7:142417/1‑149 (MQ=255)                             gCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCtcgacccgctgccacagtggctcgccggcctggcttt                                                                                                                 <  4:299367‑M1/149‑38 (MQ=255)                                 ggCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTcgcccg                                                                                                             >  1:229450/1‑149 (MQ=255)                                 ggCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCAGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTcgcccg                                                                                                             >  4:184037/1‑149 (MQ=255)                                       gCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGcc                                                                                                       <  5:314481/149‑1 (MQ=255)                                            gAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCg                                                                                                                                  >  8:147459/1‑117 (MQ=255)                                            gAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCg                                                                                                                                  <  7:147459/117‑1 (MQ=255)                                                   aGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGc                                                                                            >  2:270679/1‑148 (MQ=255)                                                        cAGCCCGCAAGGCATGCGCATCCCGGGGTTGGCGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACt                                                                                        <  1:327253/147‑1 (MQ=255)                                                           cccGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGgcgc                                                                                   <  2:226406/149‑1 (MQ=255)                                                              gcaaggcaagCGCATCTCGGGGTTGGAGCGGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCATTTCGAAAGCCAGGCGGGCGAGCCACTGTGGCAGCGGGTCTAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGcgccgc                                                                                <  6:51700/149‑1 (MQ=255)                                                              gcaaggcaagCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGa                                                                                                    >  6:241375/1‑129 (MQ=255)                                                              gcaaggcaagCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGa                                                                                                    <  5:241375/129‑1 (MQ=255)                                                                 aggcaagCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGc                                                                             <  5:233103/149‑1 (MQ=255)                                                                  ggcaagCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGc                                                                             >  4:163173/1‑148 (MQ=255)                                                                       gcgcATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGc                                                                       <  8:73213/149‑1 (MQ=255)                                                                        cgcATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGcc                                                                      <  3:263424/149‑1 (MQ=255)                                                                                ggggTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGc                                                              <  4:42793/149‑1 (MQ=255)                                                                                ggggTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGc                                                              <  1:270679/149‑1 (MQ=255)                                                                                  ggTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGt                                                            >  7:146924/1‑149 (MQ=255)                                                                                  ggTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGt                                                            >  6:102367/1‑149 (MQ=255)                                                                                      ggAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTAc                                                         <  2:229450/148‑1 (MQ=255)                                                                                        aGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTg                                                      >  5:289587/1‑149 (MQ=255)                                                                                            ggagCAGGGCCTGGGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAgg                                                  <  4:80667/146‑1 (MQ=255)                                                                                                cAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCa                                              <  3:184037/149‑1 (MQ=255)                                                                                                   ggCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCAccc                                           <  8:146924/149‑1 (MQ=255)                                                                                                           ccGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTgg                                    <  7:138922/148‑1 (MQ=255)                                                                                                             gCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCAc                                 >  8:214028/1‑149 (MQ=255)                                                                                                                 cTTTGGCCTTCAGATAGAACGCCAGGCCGGCTAGCCACTGTGGCAGCGGGTCGAGGCCTTGCTCGCCCGCCAGCCTGAGGATTGTCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCACCCAc                             <  8:142417/149‑1 (MQ=255)                                                                                                                 cTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCACCCAc                             <  6:289587/149‑1 (MQ=255)                                                                                                                     ggCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCACCCACGGc                          <  5:102367/148‑1 (MQ=255)                                                                                                                      gCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCACCCACGGCaa                        >  2:241296/1‑149 (MQ=255)                                                                                                                       ccTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAgg                                                  >  3:29903/1‑122 (MQ=255)                                                                                                                       ccTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAgg                                                  <  4:29903/122‑1 (MQ=255)                                                                                                                         tGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGc                                                     >  2:41757/1‑117 (MQ=255)                                                                                                                         tGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGc                                                     <  1:41757/117‑1 (MQ=255)                                                                                                                              ttCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCa                                  >  4:124202/1‑131 (MQ=255)                                                                                                                              ttCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCa                                  <  3:124202/131‑1 (MQ=255)                                                                                                                                  aaaGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgc            <  4:299367‑M2/149‑113 (MQ=255)                                                                                                                                      ccAGGCCtcgacccgctgccacagtggctcgccggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgccagc        >  7:75959‑M1/1‑7 (MQ=255)                                                                                                                                      ccAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgccagc        <  3:10828‑M2/149‑117 (MQ=255)                                                                                                                                       cAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgccagcg       <  2:270011‑M2/149‑118 (MQ=255)                                                                                                                                        aGGCCtcgacccgctgccacagtggctcgccggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgccagcgc      <  3:42793‑M1/149‑145 (MQ=255)                                                                                                                                        aGGCCtcgacccgctgccacagtggctcgccggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgcattgcgggctgtagctgacgctccaggcctggccctgccagcgc      <  1:226406‑M1/149‑145 (MQ=255)                                                                                                                                           cctcgacccgctgccacagtggctcgccggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgccagcgcgg    >  4:285978‑M1/1‑2 (MQ=255)                                                                                                                                            ctcgacccgctgccacagtggctcgccggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgccagcgcggca  <  5:13927‑M1/149‑149 (MQ=255)                                                                                                                                            ctcgacccgctgccacagtggctcgccggcctggctttcgaactgcaggccaaaggtgcggcacaggccctgcaccggctccaaccccgtgatgcgcttgccttgcgggctgtagctgacgctccaggcctggccctgccagcgcgg    >  1:45786‑M1/1‑1 (MQ=255)                                                                                                                                            cGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCACCCACGGCAATTGGCCTCGTGATGCTCACCTc  >  1:246742/1‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                     TGGACAACAGCCAGGACCTGCCGCGCTGGCAGGGCCAGGCCTGGAGCGTCAGCTACAGCCCGCAAGGCAAGCGCATCACGGGGTTGGAGCCGGTGCAGGGCCTGTGCCGCACCTTTGGCCTGCAGTTCGAAAGCCAGGCCGGCGAGCCACTGTGGCAGCGGGTCGAGGCCTGGCTCGCCCGCCAGCCTGAGGATTGGCAACTGGCGCCGCTGCAACTGCCCGAAGTGCGTTACGTGCAGGGGCACCCAGGCTGGCACCCACGGCAATTGGCCTCGTGATGCTCACCTC  >  NC_002947/1195237‑1195524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.