New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1196535 =	63 (1.210)	3 (0.060)	3/250	NT	5.2%	coding (596/1755 nt)	xcpQ	type II secretion pathway protein XcpQ
	?	NC_002947	1196595 =	50 (1.020)					coding (656/1755 nt)	xcpQ	type II secretion pathway protein XcpQ

CTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGC  >  NC_002947/1196387‑1196683                                                                                                                                                      |                                                                                                                                                       cTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGggcagcgg                                                                                                                                                        >  2:62695/1‑149 (MQ=255) cTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGggcagcgg                                                                                                                                                        >  8:3200/1‑149 (MQ=255)  tCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGggcagcgg                                                                                                                                                        >  8:144842/1‑148 (MQ=255)    ggggccgaccatgaccacggcattggtaccttcttcgtattccaggcggatgcccgagccaccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcgc                                                                                                                                                       >  5:287289‑M1/147‑148 (MQ=255)    ggggccgaccatgaccacggcattggtaccttcttcgtattccaggcggatgcccgagccaccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcgc                                                                                                                                                       >  6:77794‑M1/147‑148 (MQ=255)    aaaCCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGggcagcggc                                                                                                                                                       <  6:235961/147‑1 (MQ=255)        cGCTGATCGACCCGCGAGTTGGGGTTATTAGACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCAcc                                                                                                                                                 >  1:30800/1‑149 (MQ=255)             aTCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGC‑CCGCCATCAAGAGGTACAGGGCAGCGGCAGCACACAg                                                                                                                                              >  8:83910/1‑147 (MQ=255)              tCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTg                                                                                                                                           <  5:269695/149‑1 (MQ=255)               cGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGa                                                                                                                                          >  5:136875/1‑149 (MQ=255)                 aCCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATc                                                                                                                                        >  7:253260/1‑149 (MQ=255)                 aCCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATc                                                                                                                                        >  1:126203/1‑149 (MQ=255)                   ccGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCt                                                                                                                                       >  3:25192/1‑148 (MQ=255)                   ccGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTa                                                                                                                                      >  5:228823/1‑149 (MQ=255)                     gcgAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGgcagca                                                                                                                                                   >  6:26143/1‑134 (MQ=255)                     gcgAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGgcagca                                                                                                                                                   <  5:26143/134‑1 (MQ=255)                     gcgAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACt                                                                                                                                    >  4:34971/1‑149 (MQ=255)                      cgAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACtt                                                                                                                                   <  4:25192/149‑1 (MQ=255)                        aGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGATCCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTg                                                                                                                                  <  1:239456/149‑1 (MQ=255)                        aGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTgc                                                                                                                                 <  7:3200/149‑1 (MQ=255)                         gTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTgcg                                                                                                                                >  8:240475/1‑149 (MQ=255)                         gTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGAAACCTAGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTgcg                                                                                                                                >  5:26094/1‑149 (MQ=255)                          ttGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTgcgc                                                                                                                               <  2:126203/149‑1 (MQ=255)                             gggTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑At                                                                                                                           <  8:253260/149‑1 (MQ=255)                                  attaCACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCaa                                                                                                                      >  1:310934/1‑149 (MQ=255)                                   ttaCACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCt                                                                                                                                       >  8:168845/1‑132 (MQ=255)                                   ttaCACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAAt                                                                                                                     >  2:319593/1‑149 (MQ=255)                                     acacCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGc                                                                                                                   >  3:89961/1‑149 (MQ=255)                                     acacCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGc                                                                                                                   >  7:25989/1‑149 (MQ=255)                                        ccGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCgg                                                                                                                <  1:287150/149‑1 (MQ=255)                                            tccaggcggatgcccgagccaccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCg                                                                                                              <  2:44233‑M1/42‑1 (MQ=255)                                                ggcggcGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTgg                                                                                                        >  4:297333/1‑149 (MQ=255)                                                ggcggcGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTgg                                                                                                        <  7:83169/149‑1 (MQ=255)                                                 gcggcgCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGt                                                                                                       <  6:228823/149‑1 (MQ=255)                                                  cggcgCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTc                                                                                                      <  8:25989/149‑1 (MQ=255)                                                      gcACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAgg                                                                                                  >  7:40067/1‑149 (MQ=255)                                                      gcACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAgg                                                                                                  <  7:240475/149‑1 (MQ=255)                                                          cAGTTGGTGGTGACTGACTGGCGCAGCAACCTAGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCTCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGtgct                                                                                              >  7:155282/1‑149 (MQ=255)                                                             ttGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCg                                                                                           <  6:136875/149‑1 (MQ=255)                                                             gccaccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcGCAGCACCCAGGTGATCTACTTGCGCCCATGCCAATGCCGGCGAAGTGGTCAAGGtgctg                                                                                             >  1:44233‑M1/90‑149 (MQ=255)                                                               ggtggtGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                         >  3:229510/1‑149 (MQ=255)                                                               caccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGa                                                                                          >  4:181537‑M1/88‑149 (MQ=255)                                                                gtggtgACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCTCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGTCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                         <  6:26094/148‑1 (MQ=255)                                                                      actgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCa                                                                                  <  8:51436/148‑1 (MQ=255)                                                                      actgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAg                                                                                 >  6:31551/1‑149 (MQ=255)                                                                        tgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGc                                                                                >  7:212086/1‑148 (MQ=255)                                                                        tgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGc                                                                                >  5:214044/1‑148 (MQ=255)                                                                         gctggcgcagcaggctggcgatgcgtgtcgaggttgctgcgccagCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGc                                                                                >  1:4307‑M2/46‑147 (MQ=255)                                                                          actgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCa                                                                              <  8:40067/148‑1 (MQ=255)                                                                              gcgcagcaggctggcgatgcgttcgaggttgctgcgccagCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTAGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                         >  2:37890‑M2/41‑134 (MQ=255)                                                                              gcgcagcaggctggcgatgcgttcgaggttgctgcgccagCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTAGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                         <  1:37890‑M2/94‑1 (MQ=255)                                                                                  atgaagcTCGAACGCATCGCCAGCCTTCTGCGCGAGCTCTA‑CCGCCCTCTAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATTCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGc                                                                     <  8:155282/143‑1 (MQ=255)                                                                                  AGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGc                                                                     >  4:89961‑M1/1‑149 (MQ=255)                                                                                    CAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCgg                                                                   >  7:144842‑M1/1‑149 (MQ=255)                                                                                           gAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCgg                                                             <  5:9704/148‑1 (MQ=255)                                                                                            aaCGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGtt                                                           <  6:214044/149‑1 (MQ=255)                                                                                               gCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTg                                                          >  6:14985/1‑147 (MQ=255)                                                                                               gCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTg                                                          >  5:196527/1‑147 (MQ=255)                                                                                               gCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGaa                                                        <  8:212086/149‑1 (MQ=255)                                                                                                cATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAg                                                       <  2:310934/149‑1 (MQ=255)                                                                                                  tCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAACACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGgc                                                     <  5:297021/149‑1 (MQ=255)                                                                                                    cccAGCCTGCTGCGGCAGCTCGA‑CCGCCCTAAAGCGGGACCGGGCATCGGCAGCACCCAGGGGAGCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGgc                                                     <  8:90742/146‑1 (MQ=255)                                                                                                        gCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGTGCAGCGGCAGCACCCAGGTGATCTACATGCGCC‑ATGACAATGCCGCCGAAGTGGTCAAGGAGCTGCCAGG‑GCTAAGCCAGGAAGGGGCGGTGCCGGTTGAAGTAGCGGGt                                               >  2:291622/1‑149 (MQ=255)                                                                                                         ccTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGt                                               >  6:254330/1‑148 (MQ=255)                                                                                                         ccTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGt                                               >  3:317768/1‑148 (MQ=255)                                                                                                          ctgctgCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGa                                             <  3:34971/149‑1 (MQ=255)                                                                                                            gctgccccagCTCGT‑CCGCCCTGAATAGGTACCGGGCAGCGGCATGACCCAGGGGATCTACTTGCGCC‑ATTCCAATGCCGGCGAAGGGGTCAATGTGCGGCGTGGCGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAg                                            <  1:62695‑M2/139‑1 (MQ=255)                                                                                                             ctgcgccagCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGTGTGAg                                            <  4:229510‑M2/138‑1 (MQ=255)                                                                                                                cgccagCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGTTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGCCGGTGCCGGTTGAAGGCGCGGGTGAGGCa                                         >  4:88349‑M2/7‑147 (MQ=255)                                                                                                                cgccagCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCaga                                       <  2:30800‑M2/143‑1 (MQ=255)                                                                                                                   cagCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAggg                                    >  5:70029‑M2/4‑149 (MQ=255)                                                                                                                     gCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGc                                   >  5:64099‑M2/2‑148 (MQ=255)                                                                                                                         gA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAgg                               <  5:254330/148‑1 (MQ=255)                                                                                                                         gA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAg                                <  1:304645/147‑1 (MQ=255)                                                                                                                          a‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGAc                             >  6:312085/1‑149 (MQ=255)                                                                                                                               cccTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGAccggc                         >  5:308569/1‑149 (MQ=255)                                                                                                                                  tCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGAccggccgg                      >  4:185417/1‑149 (MQ=255)                                                                                                                                      gagGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCggtggt                  <  5:312085/149‑1 (MQ=255)                                                                                                                                        ggTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGgtggtg                 <  5:31551/148‑1 (MQ=255)                                                                                                                                            ccGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCGgctggcaccacc            <  7:83910/149‑8 (MQ=255)                                                                                                                                            ccGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAgc            >  2:290627/1‑149 (MQ=255)                                                                                                                                            ccGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAg             <  6:70029/148‑1 (MQ=255)                                                                                                                                               ggcagcggcagcACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAgccgc         <  1:319593/149‑1 (MQ=255)                                                                                                                                                   gcggcagcACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGt     <  6:196527/149‑1 (MQ=255)                                                                                                                                                   gcggcagcACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGt     <  2:4307/149‑1 (MQ=255)                                                                                                                                                   gcggcagcACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGt     >  6:48265/1‑149 (MQ=255)                                                                                                                                                     ggcagcACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTgg   <  5:14985/149‑1 (MQ=255)                                                                                                                                                      GCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGc  <  6:47710‑M1/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                       CTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGA‑CCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCC‑ATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGC  >  NC_002947/1196387‑1196683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.