New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1196535 =	63 (1.210)	3 (0.060)	3/250	NT	5.2%	coding (596/1755 nt)	xcpQ	type II secretion pathway protein XcpQ
	?	NC_002947	1196595 =	50 (1.020)					coding (656/1755 nt)	xcpQ	type II secretion pathway protein XcpQ

TTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGCCCC  >  NC_002947/1196447‑1196740                                                                                                                                                     |                                                                                                                                                   ttGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCg                                                                                                                                                    <  6:136875/149‑1 (MQ=255)  caccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGa                                                                                                                                                   >  4:181537‑M1/88‑149 (MQ=255)   ggtggtGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                                                                                  >  3:229510/1‑149 (MQ=255)    gtggtgACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCTCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGTCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                                                                                  <  6:26094/148‑1 (MQ=255)          actgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCa                                                                                                                                           <  8:51436/148‑1 (MQ=255)          actgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAg                                                                                                                                          >  6:31551/1‑149 (MQ=255)            tgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGc                                                                                                                                         >  7:212086/1‑148 (MQ=255)            tgactgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGc                                                                                                                                         >  5:214044/1‑148 (MQ=255)             gctggcgcagcaggctggcgatgcgtgtcgaggttgctgcgccagCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGc                                                                                                                                         >  1:4307‑M2/46‑147 (MQ=255)              actgGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCa                                                                                                                                       <  8:40067/148‑1 (MQ=255)                  gcgcagcaggctggcgatgcgttcgaggttgctgcgccagCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTAGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                                                                                  <  1:37890‑M2/94‑1 (MQ=255)                  gcgcagcaggctggcgatgcgttcgaggttgctgcgccagCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTAGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                                                                                  >  2:37890‑M2/41‑134 (MQ=255)                      atgaagcTCGAACGCATCGCCAGCCTTCTGCGCGAGCTCTACCGCCCTCTAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATTCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGc                                                                                                                              <  8:155282/143‑1 (MQ=255)                      AGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGc                                                                                                                              >  4:89961‑M1/1‑149 (MQ=255)                        CAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCgg                                                                                                                            >  7:144842‑M1/1‑149 (MQ=255)                               gAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCgg                                                                                                                      <  5:9704/148‑1 (MQ=255)                                aaCGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGtt                                                                                                                    <  6:214044/149‑1 (MQ=255)                                   gCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTg                                                                                                                   >  5:196527/1‑147 (MQ=255)                                   gCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTg                                                                                                                   >  6:14985/1‑147 (MQ=255)                                   gCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGaa                                                                                                                 <  8:212086/149‑1 (MQ=255)                                    cATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAg                                                                                                                <  2:310934/149‑1 (MQ=255)                                      tCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAACACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGgc                                                                                                              <  5:297021/149‑1 (MQ=255)                                        cccAGCCTGCTGCGGCAGCTCGACCGCCCTAAAGCGGGACCGGGCATCGGCAGCACCCAGGGGAGCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGgc                                                                                                              <  8:90742/146‑1 (MQ=255)                                            gCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGTGCAGCGGCAGCACCCAGGTGATCTACATGCGCCATGACAATGCCGCCGAAGTGGTCAAGGAGCTGCCAGG‑GCTAAGCCAGGAAGGGGCGGTGCCGGTTGAAGTAGCGGGt                                                                                                        >  2:291622/1‑149 (MQ=255)                                             ccTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGt                                                                                                        >  3:317768/1‑148 (MQ=255)                                             ccTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGt                                                                                                        >  6:254330/1‑148 (MQ=255)                                              ctgctgCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGa                                                                                                      <  3:34971/149‑1 (MQ=255)                                                gctgccccagCTCGTCCGCCCTGAATAGGTACCGGGCAGCGGCATGACCCAGGGGATCTACTTGCGCCATTCCAATGCCGGCGAAGGGGTCAATGTGCGGCGTGGCGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAg                                                                                                     <  1:62695‑M2/139‑1 (MQ=255)                                                 ctgcgccagCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGTGTGAg                                                                                                     <  4:229510‑M2/138‑1 (MQ=255)                                                    cgccagCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGTTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGCCGGTGCCGGTTGAAGGCGCGGGTGAGGCa                                                                                                  >  4:88349‑M2/7‑147 (MQ=255)                                                    cgccagCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCaga                                                                                                <  2:30800‑M2/143‑1 (MQ=255)                                                       cagCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAggg                                                                                             >  5:70029‑M2/4‑149 (MQ=255)                                                         gCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGc                                                                                            >  5:64099‑M2/2‑148 (MQ=255)                                                             gACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAgg                                                                                        <  5:254330/148‑1 (MQ=255)                                                             gACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAg                                                                                         <  1:304645/147‑1 (MQ=255)                                                              aCCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGAc                                                                                      >  6:312085/1‑149 (MQ=255)                                                                  cccTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGAccggc                                                                                  >  5:308569/1‑149 (MQ=255)                                                                     tCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGAccggccgg                                                                               >  4:185417/1‑149 (MQ=255)                                                                         gagGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCggtggt                                                                           <  5:312085/149‑1 (MQ=255)                                                                           ggTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGgtggtg                                                                          <  5:31551/148‑1 (MQ=255)                                                                               ccGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCGgctggcaccacc                                                                     <  7:83910/149‑8 (MQ=255)                                                                               ccGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAgc                                                                     >  2:290627/1‑149 (MQ=255)                                                                               ccGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAg                                                                      <  6:70029/148‑1 (MQ=255)                                                                                  ggcagcggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAgccgc                                                                  <  1:319593/149‑1 (MQ=255)                                                                                      gcggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGt                                                              <  6:196527/149‑1 (MQ=255)                                                                                      gcggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGt                                                              >  6:48265/1‑149 (MQ=255)                                                                                      gcggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGt                                                              <  2:4307/149‑1 (MQ=255)                                                                                       tcgcagcaccttgaccacttcgccggcattggcatggcgcaagtagatcacctgggtgctgcGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTg                                                             >  4:181537‑M2/63‑149 (MQ=255)                                                                                        ggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTgg                                                            <  5:14985/149‑1 (MQ=255)                                                                                         cagcaccttgaccacttcgccggcattggcatgggcgcaagtagatcacctgggtgctgcGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGc                                                           >  1:44233‑M2/61‑149 (MQ=255)                                                                                         GCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGc                                                           <  6:47710‑M1/149‑1 (MQ=255)                                                                                              ACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCggg                                                      <  2:300870‑M1/149‑1 (MQ=255)                                                                                                 cAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCAt                                                   >  2:28542/1‑149 (MQ=255)                                                                                                       aTCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGcc                                              <  1:290627/148‑1 (MQ=255)                                                                                                        tCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTg                                            >  7:185318/1‑149 (MQ=255)                                                                                                           cgccggcattggcatggcgcaagtagatcacctgggtgctgcGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGa                                          <  2:44233‑M2/106‑1 (MQ=255)                                                                                                            cTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTgg                                           <  1:28542/146‑1 (MQ=255)                                                                                                               gcgcCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATa                                       <  4:317768/147‑1 (MQ=255)                                                                                                                  ccATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACg                                     >  6:120079/1‑146 (MQ=255)                                                                                                                       ccAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAgg                              >  5:136244/1‑148 (MQ=255)                                                                                                                         aaTGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTAc                           >  4:54067/1‑149 (MQ=255)                                                                                                                             ccGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAAt                       <  5:48265/149‑1 (MQ=255)                                                                                                                               ggCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGc                     >  6:91778/1‑149 (MQ=255)                                                                                                                                gCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGc                                               <  1:239084/122‑1 (MQ=255)                                                                                                                                gCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGc                                               >  2:239084/1‑122 (MQ=255)                                                                                                                                gCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACga                                    >  2:316733/1‑133 (MQ=255)                                                                                                                                 cGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCg                   <  5:91778/149‑1 (MQ=255)                                                                                                                                   aaGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTg                 <  6:308569/149‑1 (MQ=255)                                                                                                                                      tGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGt               >  5:12775/1‑148 (MQ=255)                                                                                                                                       ggTCAAGGTGCTGCGAGG‑GCTCAGTCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCa             >  4:204462/1‑149 (MQ=255)                                                                                                                                         tCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATg           <  6:64099/149‑1 (MQ=255)                                                                                                                                           aaGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATACCGTGGTCATGGt         >  3:130375/1‑149 (MQ=255)                                                                                                                                                   gcGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGcccc  >  6:77794‑M2/3‑148 (MQ=255)                                                                                                                                                   gcGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGcccc  >  5:287289‑M2/3‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGG‑GCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGCCCC  >  NC_002947/1196447‑1196740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.