| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1312668 = | 52 (1.000) | 4 (0.080) | 4/248 | NT | 7.1% | coding (1989/2847 nt) | rapA | RNA polymerase‑associated protein RapA |
| ? | NC_002947 | 1312776 = | 56 (1.150) | coding (1881/2847 nt) | rapA | RNA polymerase‑associated protein RapA | |||||
CTGTCGATGCCGAAGGCGTCGAACAGGGTTTCCATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCGGTGGGGCAGGTGTTGA > NC_002947/1312522‑1312810 | cTGTCGATGCCGAAGGCGTCGAACAGGGTTTCCATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAg > 7:141096/1‑149 (MQ=255) cttgaccggatcggccagaagcacactatccagttgcacatcccgtacctgcaggacagcccgcaagagcgcctgttccagtggtaccacgaagggctcaacgccttcctcaacacctgccccaccggcaatgccctgcagcacCAGtt > 2:243545‑M1/145‑149 (MQ=255) gaccggatcggccagaagcacactatccagttgcacatcccgtacctgcaggacagcccgcaagagcgcctgttccagtggtaccacgaagggctcaacgccttcctcaacacctgccccaccggcaatgccctgcagcacCAGTTCgg < 6:8137‑M1/8‑1 (MQ=255) gATGCCGAAGGCGTCGAACAGGGTTTCCATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCgg > 1:299238/1‑149 (MQ=255) ggCGTCGAACAGGGTTTCCATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGgc < 1:299492/149‑1 (MQ=255) gTCGAACAGGGTTTCCATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGgcgtt > 6:201297/1‑149 (MQ=255) gTCGAACAGGGTTTCCATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGgcgtt > 5:41280/1‑149 (MQ=255) gTCGAACAGGGTATCCATGTAGATCGGCACGGCGAACTGGTCGTCCTGATAGAGAAAGGCCACGACCAGCGCCTGACCTTCGCAGGCGACGCCGGAATTGAGATCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTACCACgcgtt > 8:189679/1‑149 (MQ=255) ggTTTCCATGGAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCgttcgcgttcgc > 8:233687/1‑149 (MQ=255) cATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCggg > 7:69683/1‑149 (MQ=255) cATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCgg < 8:141096/148‑1 (MQ=255) gTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGt > 8:240680/1‑149 (MQ=255) gTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGt > 7:39944/1‑149 (MQ=255) aGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGgcgttcgcg < 8:213224/133‑1 (MQ=255) aGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGgcgttcgcg > 7:213224/1‑133 (MQ=255) aGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCg < 7:233687/149‑1 (MQ=255) aGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGATCGCGTTCGCTGCGGGCGTCg > 8:283554/1‑149 (MQ=255) gATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCgg > 7:86207/1‑149 (MQ=255) aGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAg < 1:122152/149‑1 (MQ=255) gggCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAgg < 7:75135/149‑1 (MQ=255) ggCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTATGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAggg > 2:15144/1‑149 (MQ=255) gtcCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCt > 5:222577/1‑149 (MQ=255) cTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTATGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTg < 1:15144/148‑1 (MQ=255) gTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGCCTATCCCAGGCCATGgtt > 8:76350/1‑149 (MQ=255) ttCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGGCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGtttt < 7:76350/149‑1 (MQ=255) ttCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCTGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGttt < 8:86207/148‑1 (MQ=255) cGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTc < 1:251664/148‑1 (MQ=255) tGGCCTCGACCTGCGCCTGACCTTCGCGGGCGCCGCCTGAATTGAGTTCCAGCTGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCTGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCt < 5:78742/149‑1 (MQ=255) tGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCt > 3:214203/1‑149 (MQ=255) gCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTc < 2:299238/149‑1 (MQ=255) ccTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTc > 2:324692/1‑148 (MQ=255) ccTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCg < 1:324692/149‑1 (MQ=255) cTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTc > 4:181078/1‑147 (MQ=255) cagtggtaccacgaagggctcaacgccttcctcaacacctgccccaccggcaatgccctgcagcacCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGag < 1:161563‑M1/81‑1 (MQ=255) cAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCg > 8:213263/1‑149 (MQ=255) ccacgaagggctcaacgccttcctcaacacctgccccaccggcaatgccctgcagcacCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGgcag < 1:237470‑M1/90‑1 (MQ=255) cTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGt < 7:283554/149‑1 (MQ=255) gCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGATGCGGGCGTCGCCCACAAGGGTATCACAGGCCTTGTTTTCTCCGCATTCGAGAACCGCAAGCAGGCGAggac > 4:218755/1‑147 (MQ=255) ggCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGa < 4:214203/149‑1 (MQ=255) gcgcCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGaa > 6:90127/1‑149 (MQ=255) cgccttcctcaacacctgccccaccggcaatgccctgcagcacCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAAc > 2:237470‑M1/44‑149 (MQ=255) gccgccGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCAACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACt > 2:9205/1‑149 (MQ=255) gccgGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGt > 5:14437/1‑149 (MQ=255) gccgGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGt > 3:279112/1‑149 (MQ=255) gccgGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGt > 3:166514/1‑149 (MQ=255) cctcaacacctgccccaccggcaatgccctgcagcacCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGt > 2:161563‑M1/38‑147 (MQ=255) gAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGtgctg < 7:213263/149‑1 (MQ=255) ttGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAg < 8:39944/149‑1 (MQ=255) ccAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTg > 2:179542/1‑149 (MQ=255) gcagGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACt < 2:22060/129‑1 (MQ=255) gcagGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACt > 1:22060/1‑129 (MQ=255) cagGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCgg < 7:222861/149‑1 (MQ=255) agGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGAGTGGGCCGAACTGGTGCTGCAGGGCATTTCCGGt > 7:278656/1‑149 (MQ=255) gCGGTCACGGCGAGTGTTCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGGCACGAGTGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCTAACTGGTGCTGCAGGGCATTGCCGGTgg < 7:189679/149‑1 (MQ=255) gCGGGCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCGGTgg < 8:252695/149‑1 (MQ=255) tCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCGGTgggg > 2:199681/1‑147 (MQ=255) aCGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCGGTGGGGCAgg > 7:78922/1‑149 (MQ=255) ccAGTGTGCAGTTCGGATTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGACACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCGGTGGGGCAGGTGtt > 8:174521/1‑149 (MQ=255) aGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCGGTGGGGCAGGTGTTGa < 7:240680/149‑1 (MQ=255) | CTGTCGATGCCGAAGGCGTCGAACAGGGTTTCCATGTAGATCGGCAGGGCGAACTGGTCGTCCTGTTCGAGAATGGCCTCGACCAGCGCCTGACCTTCGCCGGCGCCGCCGGAATTGAGTTCCAGCAGGCGGTCACGGCCAGTGTGCAGTTCGGCTTCCAGGCGTTCGCGTTCGCTGCGGGCGTCGGCCACCAGGGTATCCCAGGCCTTGTTTTCGCCGCCTTCGAGCAGCGGCAGCAGGCGTGGGCCGAACTGGTGCTGCAGGGCATTGCCGGTGGGGCAGGTGTTGA > NC_002947/1312522‑1312810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |